Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm28759-201ENSMUST00000187621 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28831-201ENSMUST00000187739 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29034-201ENSMUST00000188099 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28752-201ENSMUST00000188340 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28569-201ENSMUST00000188748 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28120-201ENSMUST00000188812 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28369-201ENSMUST00000188993 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28537-201ENSMUST00000189026 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28861-201ENSMUST00000189681 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28717-201ENSMUST00000189950 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29180-201ENSMUST00000190003 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29575-201ENSMUST00000190597 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29631-201ENSMUST00000191065 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28160-201ENSMUST00000191229 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29469-201ENSMUST00000191448 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Trbv22-201ENSMUST00000191697 291 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm37658-201ENSMUST00000192672 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm37129-201ENSMUST00000195791 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm26265-202ENSMUST00000196326 133 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm24494-201ENSMUST00000083804 81 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Gm13475-201ENSMUST00000119290 234 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Gm6829-201ENSMUST00000119858 360 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Gm26038-201ENSMUST00000158151 106 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Gm17052-201ENSMUST00000165496 289 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Gm34139-201ENSMUST00000196166 294 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Gm43993-201ENSMUST00000203972 247 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.04□□□□□ -2.24
Upf3bQ3ULL6 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.03□□□□□ -2.24
Upf3bQ3ULL6 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.03□□□□□ -2.24
Upf3bQ3ULL6 Gm24510-201ENSMUST00000174965 94 ntBASIC1.03□□□□□ -2.24
Upf3bQ3ULL6 Gm43199-201ENSMUST00000200019 307 ntBASIC1.03□□□□□ -2.24
Upf3bQ3ULL6 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.03□□□□□ -2.24
Upf3bQ3ULL6 Gm45315-201ENSMUST00000209283 333 ntBASIC1.03□□□□□ -2.24
Upf3bQ3ULL6 Snord1a-201ENSMUST00000083160 74 ntBASIC1.03□□□□□ -2.24
Upf3bQ3ULL6 Gm22673-201ENSMUST00000104415 131 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm23328-201ENSMUST00000157418 132 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm24241-201ENSMUST00000157787 145 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm26435-201ENSMUST00000179026 107 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Mir8119-201ENSMUST00000183371 129 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm29661-201ENSMUST00000186781 315 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm29308-201ENSMUST00000188863 315 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm45878-201ENSMUST00000211839 241 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Snora41-201ENSMUST00000082668 132 ntBASIC1.02□□□□□ -2.25
Upf3bQ3ULL6 Gm22003-201ENSMUST00000101885 107 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm12449-201ENSMUST00000117572 234 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm14923-201ENSMUST00000118270 155 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm13396-201ENSMUST00000120617 271 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm23410-201ENSMUST00000179967 107 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm22756-201ENSMUST00000180118 107 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm37089-201ENSMUST00000195616 129 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm46997-201ENSMUST00000222108 217 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm22306-201ENSMUST00000082692 107 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm22505-201ENSMUST00000082956 108 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm22363-201ENSMUST00000083100 108 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm23814-201ENSMUST00000083230 102 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm23095-201ENSMUST00000083446 107 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Mir196b-201ENSMUST00000083509 85 ntBASIC1.01□□□□□ -2.25
Upf3bQ3ULL6 Gm22785-201ENSMUST00000104087 132 ntBASIC1□□□□□ -2.25
Upf3bQ3ULL6 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1□□□□□ -2.25
Upf3bQ3ULL6 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1□□□□□ -2.25
Upf3bQ3ULL6 Mir6380-201ENSMUST00000184334 81 ntBASIC1□□□□□ -2.25
Upf3bQ3ULL6 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1□□□□□ -2.25
Upf3bQ3ULL6 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Upf3bQ3ULL6 Gm26314-201ENSMUST00000083891 107 ntBASIC1□□□□□ -2.25
Upf3bQ3ULL6 Gm25683-201ENSMUST00000083940 131 ntBASIC1□□□□□ -2.25
Upf3bQ3ULL6 Gm37642-201ENSMUST00000193166 1735 ntBASIC1□□□□□ -2.25
Upf3bQ3ULL6 Gm26339-201ENSMUST00000102368 99 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm15529-201ENSMUST00000121833 994 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm25109-201ENSMUST00000122474 114 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm23411-201ENSMUST00000157988 62 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm22425-201ENSMUST00000158532 138 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm2962-201ENSMUST00000159266 336 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm26652-202ENSMUST00000181672 475 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm27668-201ENSMUST00000184188 120 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Mir7052-201ENSMUST00000184821 65 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm20118-201ENSMUST00000187207 162 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm28848-201ENSMUST00000189984 168 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm38395-201ENSMUST00000199904 830 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm23731-201ENSMUST00000083749 107 ntBASIC0.99□□□□□ -2.25
Upf3bQ3ULL6 Gm24588-201ENSMUST00000116696 83 ntBASIC0.98□□□□□ -2.25
Upf3bQ3ULL6 Gm12432-201ENSMUST00000119540 186 ntBASIC0.98□□□□□ -2.25
Upf3bQ3ULL6 Gm23557-201ENSMUST00000157820 138 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 131 ms