Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.31□□□□□ -2.04
Cbx4O55187 Gm23803-201ENSMUST00000104610 132 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm25529-201ENSMUST00000104850 92 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm6829-201ENSMUST00000119858 360 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm22321-201ENSMUST00000157152 104 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm24480-201ENSMUST00000157442 103 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Snord11-201ENSMUST00000158468 84 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm27545-201ENSMUST00000184755 202 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm43676-201ENSMUST00000197532 540 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm44256-201ENSMUST00000203304 335 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm43993-201ENSMUST00000203972 247 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.3□□□□□ -2.04
Cbx4O55187 Gm45445-201ENSMUST00000209586 232 ntBASIC2.3□□□□□ -2.04
Cbx4O55187 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.3□□□□□ -2.04
Cbx4O55187 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Cbx4O55187 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Cbx4O55187 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Gm3788-201ENSMUST00000119949 136 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Gm12686-201ENSMUST00000120546 397 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Gm14846-201ENSMUST00000121868 216 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Gm25333-201ENSMUST00000158035 246 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Cbx4O55187 Mir3103-201ENSMUST00000175474 67 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Gm7958-201ENSMUST00000178255 468 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Gm7950-201ENSMUST00000179633 468 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Trbv18-201ENSMUST00000194256 294 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.29□□□□□ -2.04
Cbx4O55187 Gm45859-201ENSMUST00000212794 214 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Cbx4O55187 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Cbx4O55187 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.29□□□□□ -2.04
Cbx4O55187 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Cbx4O55187 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Cbx4O55187 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Cbx4O55187 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Gm23535-201ENSMUST00000157542 106 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Gm23381-201ENSMUST00000157676 94 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Gm25664-201ENSMUST00000157697 107 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Mir7068-201ENSMUST00000183439 74 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Mir6540-201ENSMUST00000184886 108 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Gm28453-203ENSMUST00000187041 189 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Trbv7-201ENSMUST00000193339 402 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Gm43220-201ENSMUST00000199299 282 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.28□□□□□ -2.04
Cbx4O55187 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.27□□□□□ -2.05
Cbx4O55187 Mir881-201ENSMUST00000104844 78 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Mir467g-201ENSMUST00000116906 120 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm13885-201ENSMUST00000117569 187 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm14652-201ENSMUST00000118479 235 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm24896-201ENSMUST00000122741 135 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm16355-201ENSMUST00000128606 231 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm25888-201ENSMUST00000157778 302 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm22517-201ENSMUST00000158265 136 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm22947-201ENSMUST00000158559 91 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm23005-201ENSMUST00000158950 136 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm24573-201ENSMUST00000175499 112 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm25933-201ENSMUST00000178943 108 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm27793-201ENSMUST00000183405 76 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm28169-201ENSMUST00000190342 345 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm10092-201ENSMUST00000077110 180 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm26126-201ENSMUST00000083188 164 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm24163-201ENSMUST00000093660 132 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.27□□□□□ -2.05
Cbx4O55187 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cbx4O55187 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Cbx4O55187 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm22784-201ENSMUST00000104088 132 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm14922-201ENSMUST00000121131 163 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm23889-201ENSMUST00000122689 104 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm24392-201ENSMUST00000158136 103 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm25488-201ENSMUST00000158728 118 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm24667-201ENSMUST00000158938 103 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Cbx4O55187 Gm25615-201ENSMUST00000177836 94 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm22450-201ENSMUST00000179641 107 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm25473-201ENSMUST00000180191 107 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Cbx4O55187 Gm27369-201ENSMUST00000185182 71 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.26□□□□□ -2.05
Cbx4O55187 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm24856-201ENSMUST00000082809 107 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm26495-201ENSMUST00000083152 137 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm26071-201ENSMUST00000083261 107 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm23039-201ENSMUST00000083870 161 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Gm24521-201ENSMUST00000083958 107 ntBASIC2.26□□□□□ -2.05
Cbx4O55187 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Cbx4O55187 Gm22193-201ENSMUST00000116868 76 ntBASIC2.25□□□□□ -2.05
Cbx4O55187 Gm12815-201ENSMUST00000121737 135 ntBASIC2.25□□□□□ -2.05
Cbx4O55187 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.25□□□□□ -2.05
Cbx4O55187 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.25□□□□□ -2.05
Cbx4O55187 Gm22883-201ENSMUST00000157376 106 ntBASIC2.25□□□□□ -2.05
Cbx4O55187 Gm23642-201ENSMUST00000157858 258 ntBASIC2.25□□□□□ -2.05
Cbx4O55187 Gm25863-201ENSMUST00000158249 329 ntBASIC2.25□□□□□ -2.05
Cbx4O55187 Gm16561-201ENSMUST00000163001 192 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 247.2 ms