Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm20438-201ENSMUST00000174441 329 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm24308-201ENSMUST00000177773 114 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Mir7225-201ENSMUST00000184178 54 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm29657-201ENSMUST00000189807 342 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm19901-201ENSMUST00000192191 495 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm44010-201ENSMUST00000204432 331 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm5023-201ENSMUST00000217442 587 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.6□□□□□ -2.15
Trim3Q9R1R2 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm22299-201ENSMUST00000082663 136 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm23142-201ENSMUST00000101848 105 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm26240-201ENSMUST00000101893 105 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Mir872-201ENSMUST00000104728 81 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm14972-201ENSMUST00000121780 364 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm23535-201ENSMUST00000157542 106 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm23090-201ENSMUST00000177331 78 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm28257-201ENSMUST00000185244 463 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm28995-201ENSMUST00000186625 261 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm37162-201ENSMUST00000191708 551 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm34783-201ENSMUST00000209159 303 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Mir340-201ENSMUST00000083483 98 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Gm22365-201ENSMUST00000093750 117 ntBASIC1.59□□□□□ -2.15
Trim3Q9R1R2 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Trim3Q9R1R2 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.59□□□□□ -2.16
Trim3Q9R1R2 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Trim3Q9R1R2 Gm23011-201ENSMUST00000104148 132 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm13729-201ENSMUST00000120328 406 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm14678-201ENSMUST00000121396 482 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm23230-201ENSMUST00000157298 133 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm23181-201ENSMUST00000158685 110 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm16162-201ENSMUST00000162296 297 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm17100-201ENSMUST00000168963 272 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm27265-201ENSMUST00000183559 77 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm27410-201ENSMUST00000183851 115 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm38041-201ENSMUST00000194445 661 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm38109-201ENSMUST00000195386 181 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm18546-201ENSMUST00000197245 676 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm43993-201ENSMUST00000203972 247 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.58□□□□□ -2.16
Trim3Q9R1R2 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.58□□□□□ -2.16
Trim3Q9R1R2 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm25929-201ENSMUST00000082784 107 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm22685-201ENSMUST00000082848 106 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm23242-201ENSMUST00000083055 107 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gm22364-201ENSMUST00000083097 98 ntBASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trim3Q9R1R2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm24079-201ENSMUST00000104352 132 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm23718-201ENSMUST00000157350 307 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Mir3569-201ENSMUST00000185080 58 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm29229-201ENSMUST00000188874 323 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm37399-201ENSMUST00000195224 416 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm43238-201ENSMUST00000196463 359 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm43427-201ENSMUST00000198188 331 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm43976-201ENSMUST00000203637 235 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm44687-201ENSMUST00000204975 235 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm44960-201ENSMUST00000207403 141 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Gm44655-201ENSMUST00000207768 423 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.57□□□□□ -2.16
Trim3Q9R1R2 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.57□□□□□ -2.16
Trim3Q9R1R2 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trim3Q9R1R2 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Mir1b-201ENSMUST00000117012 122 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm11854-201ENSMUST00000117839 446 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm11254-201ENSMUST00000122368 653 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm24262-201ENSMUST00000157431 144 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm24504-201ENSMUST00000157679 100 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Gm25035-201ENSMUST00000175414 77 ntBASIC1.56□□□□□ -2.16
Trim3Q9R1R2 Mir6351-201ENSMUST00000183826 99 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms