Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RpainQ9CWY9 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RpainQ9CWY9 Gm24119-201ENSMUST00000103979 246 ntBASIC3.18□□□□□ -1.9
RpainQ9CWY9 Gm14020-201ENSMUST00000118165 662 ntBASIC3.18□□□□□ -1.9
RpainQ9CWY9 Gm24736-201ENSMUST00000158862 130 ntBASIC3.18□□□□□ -1.9
RpainQ9CWY9 Gm27783-201ENSMUST00000183534 105 ntBASIC3.18□□□□□ -1.9
RpainQ9CWY9 Gm33866-201ENSMUST00000196911 289 ntBASIC3.18□□□□□ -1.9
RpainQ9CWY9 Gm44600-201ENSMUST00000208540 111 ntBASIC3.18□□□□□ -1.9
RpainQ9CWY9 Gm9370-201ENSMUST00000222787 609 ntBASIC3.18□□□□□ -1.9
RpainQ9CWY9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RpainQ9CWY9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RpainQ9CWY9 Snord14c-201ENSMUST00000101927 86 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Mir669b-201ENSMUST00000102172 97 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Gm25308-201ENSMUST00000104171 158 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Gm15936-201ENSMUST00000118706 460 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Gm7209-201ENSMUST00000122339 333 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Gm22966-201ENSMUST00000157957 129 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.17□□□□□ -1.9
RpainQ9CWY9 Gm20672-201ENSMUST00000176605 261 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Mir8096-201ENSMUST00000184526 127 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Mir6993-201ENSMUST00000184912 65 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Gm44429-201ENSMUST00000203542 186 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.17□□□□□ -1.9
RpainQ9CWY9 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.17□□□□□ -1.9
RpainQ9CWY9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RpainQ9CWY9 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RpainQ9CWY9 Mir1298-201ENSMUST00000116681 98 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm11598-201ENSMUST00000119257 357 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm22957-201ENSMUST00000122511 123 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm25961-201ENSMUST00000157174 135 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm22225-201ENSMUST00000157358 278 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm29005-201ENSMUST00000186773 320 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm29553-201ENSMUST00000189692 279 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm44352-201ENSMUST00000196358 110 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm45116-201ENSMUST00000207392 275 ntBASIC3.16□□□□□ -1.9
RpainQ9CWY9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RpainQ9CWY9 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RpainQ9CWY9 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.15□□□□□ -1.9
RpainQ9CWY9 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.15□□□□□ -1.9
RpainQ9CWY9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.15□□□□□ -1.9
RpainQ9CWY9 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RpainQ9CWY9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm22148-201ENSMUST00000104445 107 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm24627-201ENSMUST00000122764 138 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm14389-201ENSMUST00000140453 241 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm22532-201ENSMUST00000158822 140 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm28825-201ENSMUST00000186233 238 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm43521-201ENSMUST00000197838 255 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm43107-201ENSMUST00000198729 255 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm43199-201ENSMUST00000200019 307 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm10298-201ENSMUST00000074801 265 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Gm25136-201ENSMUST00000083253 115 ntBASIC3.15□□□□□ -1.91
RpainQ9CWY9 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RpainQ9CWY9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm24276-201ENSMUST00000102181 110 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm22373-201ENSMUST00000104584 89 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm12449-201ENSMUST00000117572 234 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm26099-201ENSMUST00000157248 109 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm22416-201ENSMUST00000158590 88 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm25490-201ENSMUST00000158734 130 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm25119-201ENSMUST00000158815 88 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm27893-201ENSMUST00000184408 194 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.14□□□□□ -1.91
RpainQ9CWY9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Gm22979-201ENSMUST00000082609 159 ntBASIC3.14□□□□□ -1.91
RpainQ9CWY9 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Mir767-201ENSMUST00000103256 107 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm23320-201ENSMUST00000104462 127 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm13922-201ENSMUST00000119505 156 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm12143-201ENSMUST00000119666 332 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm22557-201ENSMUST00000157804 102 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm22075-201ENSMUST00000158599 192 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm26157-201ENSMUST00000158974 126 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm22775-201ENSMUST00000177630 120 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm23569-201ENSMUST00000180120 120 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm28650-201ENSMUST00000188413 411 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm43899-201ENSMUST00000203675 246 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm24453-201ENSMUST00000083346 76 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Mir208a-201ENSMUST00000083498 83 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm23847-201ENSMUST00000083829 110 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Gm26327-201ENSMUST00000093724 111 ntBASIC3.13□□□□□ -1.91
RpainQ9CWY9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RpainQ9CWY9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RpainQ9CWY9 Gm25376-201ENSMUST00000104340 133 ntBASIC3.12□□□□□ -1.91
RpainQ9CWY9 Gm26249-201ENSMUST00000116708 118 ntBASIC3.12□□□□□ -1.91
RpainQ9CWY9 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 130.3 ms