Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm43676-201ENSMUST00000197532 540 ntBASIC2.09□□□□□ -2.07
Trim60Q8VI40 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.09□□□□□ -2.07
Trim60Q8VI40 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.09□□□□□ -2.07
Trim60Q8VI40 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.09□□□□□ -2.07
Trim60Q8VI40 Mir32-201ENSMUST00000083610 70 ntBASIC2.09□□□□□ -2.07
Trim60Q8VI40 Mir301-201ENSMUST00000083655 86 ntBASIC2.09□□□□□ -2.07
Trim60Q8VI40 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trim60Q8VI40 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
Trim60Q8VI40 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Trim60Q8VI40 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim60Q8VI40 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm14803-201ENSMUST00000117163 361 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm14678-201ENSMUST00000121396 482 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm14298-201ENSMUST00000139032 237 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm16356-201ENSMUST00000143300 169 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm23262-201ENSMUST00000158323 168 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm26157-201ENSMUST00000158974 126 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm20613-201ENSMUST00000175828 345 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm24618-201ENSMUST00000177718 94 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm23953-201ENSMUST00000178214 94 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm26332-201ENSMUST00000179813 94 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm22863-201ENSMUST00000180265 94 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm26200-201ENSMUST00000180273 79 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm44468-201ENSMUST00000199516 105 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.08□□□□□ -2.08
Trim60Q8VI40 Mir669i-201ENSMUST00000117007 127 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm6829-201ENSMUST00000119858 360 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm25658-201ENSMUST00000158472 128 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm22264-201ENSMUST00000178200 107 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.07□□□□□ -2.08
Trim60Q8VI40 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm29167-201ENSMUST00000190024 377 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm44858-201ENSMUST00000207360 154 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm18617-201ENSMUST00000222311 259 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm25124-201ENSMUST00000083345 164 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.07□□□□□ -2.08
Trim60Q8VI40 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Trim60Q8VI40 Gm25094-201ENSMUST00000103992 131 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Gm12351-201ENSMUST00000118727 292 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Gm13433-201ENSMUST00000121701 240 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
Trim60Q8VI40 Gm27878-201ENSMUST00000184000 106 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Mir6950-201ENSMUST00000184438 73 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Mir7661-201ENSMUST00000197023 61 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Snord43-201ENSMUST00000199549 108 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Mir1291-201ENSMUST00000199842 117 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Snora34-201ENSMUST00000083402 138 ntBASIC2.06□□□□□ -2.08
Trim60Q8VI40 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim60Q8VI40 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Mir1b-201ENSMUST00000117012 122 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm12926-201ENSMUST00000121158 409 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm24896-201ENSMUST00000122741 135 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm25115-201ENSMUST00000157187 140 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Mir7226-201ENSMUST00000184953 60 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm37377-201ENSMUST00000191733 304 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm19777-201ENSMUST00000191940 358 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm36891-201ENSMUST00000191995 655 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim60Q8VI40 Mir497-201ENSMUST00000200557 84 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm24356-201ENSMUST00000082859 106 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm23851-201ENSMUST00000083831 103 ntBASIC2.05□□□□□ -2.08
Trim60Q8VI40 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Trim60Q8VI40 Gm25090-201ENSMUST00000104000 132 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm12647-201ENSMUST00000118977 265 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm24770-201ENSMUST00000158505 92 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm21885-201ENSMUST00000178891 327 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29512-201ENSMUST00000185544 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28110-201ENSMUST00000185782 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29057-201ENSMUST00000186468 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29661-201ENSMUST00000186781 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28737-201ENSMUST00000186808 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29118-201ENSMUST00000186908 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28433-201ENSMUST00000187085 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28759-201ENSMUST00000187621 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28831-201ENSMUST00000187739 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28200-201ENSMUST00000187778 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28752-201ENSMUST00000188340 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29378-201ENSMUST00000188723 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28569-201ENSMUST00000188748 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28120-201ENSMUST00000188812 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28369-201ENSMUST00000188993 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29037-201ENSMUST00000189092 313 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28909-201ENSMUST00000189406 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm28861-201ENSMUST00000189681 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29180-201ENSMUST00000190003 315 ntBASIC2.04□□□□□ -2.08
Trim60Q8VI40 Gm29575-201ENSMUST00000190597 315 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms