Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm25863-201ENSMUST00000158249 329 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Mir3076-201ENSMUST00000175415 60 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Mir8103-201ENSMUST00000183945 107 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm29022-201ENSMUST00000190702 225 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm10092-201ENSMUST00000077110 180 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm24966-201ENSMUST00000082443 79 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm22622-201ENSMUST00000082870 129 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm26495-201ENSMUST00000083152 137 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm26265-201ENSMUST00000083277 135 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm38706-201ENSMUST00000182397 2617 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Mir344c-201ENSMUST00000103919 92 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Gm11786-201ENSMUST00000120799 155 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Gm15365-201ENSMUST00000122392 300 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Gm3852-201ENSMUST00000182781 264 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Gm27803-201ENSMUST00000183763 119 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Trbv18-201ENSMUST00000194256 294 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Gm42774-201ENSMUST00000198854 283 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Gm43220-201ENSMUST00000199299 282 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Gm20144-201ENSMUST00000203031 165 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.99□□□□□ -1.93
Brf1Q8CFK2 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Brf1Q8CFK2 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Brf1Q8CFK2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Gm25168-201ENSMUST00000104189 132 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Gm25376-201ENSMUST00000104340 133 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Gm43193-201ENSMUST00000197732 441 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Gm23040-201ENSMUST00000083869 163 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Gm23039-201ENSMUST00000083870 161 ntBASIC2.98□□□□□ -1.93
Brf1Q8CFK2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Brf1Q8CFK2 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm24594-201ENSMUST00000122502 99 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm25115-201ENSMUST00000157187 140 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm23599-201ENSMUST00000157261 251 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm22883-201ENSMUST00000157376 106 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm19901-201ENSMUST00000192191 495 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm45543-201ENSMUST00000209327 88 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm45907-201ENSMUST00000213023 193 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Brf1Q8CFK2 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm26225-201ENSMUST00000082508 135 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm24355-201ENSMUST00000082858 122 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm26494-201ENSMUST00000083154 143 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm24493-201ENSMUST00000083805 143 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Gm24164-201ENSMUST00000093663 104 ntBASIC2.97□□□□□ -1.93
Brf1Q8CFK2 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm6897-201ENSMUST00000117714 138 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm14758-201ENSMUST00000119104 138 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm12926-201ENSMUST00000121158 409 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm23391-201ENSMUST00000157579 104 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm24212-201ENSMUST00000158258 132 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm22800-201ENSMUST00000175627 94 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm29597-201ENSMUST00000188035 308 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm44024-201ENSMUST00000203008 476 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm8031-201ENSMUST00000213430 626 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm24204-201ENSMUST00000082950 107 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm24163-201ENSMUST00000093660 132 ntBASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.96□□□□□ -1.94
Brf1Q8CFK2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm22752-201ENSMUST00000102083 109 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm22678-201ENSMUST00000116974 101 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm14838-201ENSMUST00000118913 248 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm5224-201ENSMUST00000183060 350 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm27761-201ENSMUST00000184091 131 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm28627-201ENSMUST00000186141 453 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm18991-201ENSMUST00000209225 746 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Brf1Q8CFK2 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Brf1Q8CFK2 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm12513-201ENSMUST00000118617 352 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm6829-201ENSMUST00000119858 360 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm13862-201ENSMUST00000121220 197 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm25720-201ENSMUST00000157503 105 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm28020-201ENSMUST00000157739 67 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm23223-201ENSMUST00000158119 127 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm23545-201ENSMUST00000158205 104 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm24210-201ENSMUST00000158263 133 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm26214-201ENSMUST00000158581 107 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm27793-201ENSMUST00000183405 76 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm29014-201ENSMUST00000191422 326 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm37037-201ENSMUST00000194475 424 ntBASIC2.94□□□□□ -1.94
Brf1Q8CFK2 Gm44425-201ENSMUST00000203739 429 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 194.8 ms