Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.41□□□□□ -1.86
Ubp1Q811S7 Gm9370-201ENSMUST00000222787 609 ntBASIC3.41□□□□□ -1.86
Ubp1Q811S7 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Ubp1Q811S7 Gm23925-201ENSMUST00000082471 132 ntBASIC3.41□□□□□ -1.86
Ubp1Q811S7 Gm26454-201ENSMUST00000082682 107 ntBASIC3.41□□□□□ -1.86
Ubp1Q811S7 Mir340-201ENSMUST00000083483 98 ntBASIC3.41□□□□□ -1.86
Ubp1Q811S7 Mir323-201ENSMUST00000083683 86 ntBASIC3.41□□□□□ -1.86
Ubp1Q811S7 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ubp1Q811S7 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ubp1Q811S7 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ubp1Q811S7 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ubp1Q811S7 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.4□□□□□ -1.86
Ubp1Q811S7 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ubp1Q811S7 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ubp1Q811S7 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Ubp1Q811S7 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm15214-201ENSMUST00000122155 470 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm16162-201ENSMUST00000162296 297 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm17117-201ENSMUST00000163665 299 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm28030-201ENSMUST00000184987 138 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm29597-201ENSMUST00000188035 308 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm45080-201ENSMUST00000206648 283 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm9712-201ENSMUST00000210842 311 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm22297-201ENSMUST00000083312 106 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.4□□□□□ -1.87
Ubp1Q811S7 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ubp1Q811S7 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Ubp1Q811S7 Gm13560-201ENSMUST00000121865 329 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 Gm24595-201ENSMUST00000122501 110 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 Gm26403-201ENSMUST00000158500 105 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 Gm26337-201ENSMUST00000178000 79 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 Gm26175-201ENSMUST00000083794 131 ntBASIC3.39□□□□□ -1.87
Ubp1Q811S7 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ubp1Q811S7 Gm23530-201ENSMUST00000104564 137 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 Mir1298-201ENSMUST00000116681 98 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.38□□□□□ -1.87
Ubp1Q811S7 Gm23592-201ENSMUST00000157859 117 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ubp1Q811S7 Gm21007-201ENSMUST00000221024 326 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 Snora7a-201ENSMUST00000082629 140 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 Gm24147-201ENSMUST00000082763 144 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.38□□□□□ -1.87
Ubp1Q811S7 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ubp1Q811S7 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Ubp1Q811S7 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ubp1Q811S7 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm13076-201ENSMUST00000118041 204 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm23665-201ENSMUST00000158054 62 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm25491-201ENSMUST00000158733 308 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm24390-201ENSMUST00000179578 62 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Mir7658-201ENSMUST00000184043 57 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm37428-201ENSMUST00000193886 137 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm44052-201ENSMUST00000203382 396 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm44824-201ENSMUST00000207021 229 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.37□□□□□ -1.87
Ubp1Q811S7 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ubp1Q811S7 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ubp1Q811S7 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm25272-201ENSMUST00000104293 128 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm14843-201ENSMUST00000119596 212 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm24008-201ENSMUST00000157733 138 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm25519-201ENSMUST00000158392 127 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm25711-201ENSMUST00000158633 128 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm25977-201ENSMUST00000158697 85 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm22139-201ENSMUST00000158747 105 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm26160-201ENSMUST00000158965 63 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm20438-201ENSMUST00000174441 329 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm25464-201ENSMUST00000175481 107 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 AC134601.1-201ENSMUST00000221058 109 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Snora70-201ENSMUST00000083047 137 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Mir186-201ENSMUST00000083497 71 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Mir101b-201ENSMUST00000083622 97 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.36□□□□□ -1.87
Ubp1Q811S7 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ubp1Q811S7 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ubp1Q811S7 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ubp1Q811S7 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.35□□□□□ -1.87
Ubp1Q811S7 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ubp1Q811S7 Gm23718-201ENSMUST00000157350 307 ntBASIC3.35□□□□□ -1.87
Ubp1Q811S7 Gm25835-201ENSMUST00000158917 144 ntBASIC3.35□□□□□ -1.87
Ubp1Q811S7 Gm23337-201ENSMUST00000158959 118 ntBASIC3.35□□□□□ -1.87
Ubp1Q811S7 Gm22910-201ENSMUST00000178568 132 ntBASIC3.35□□□□□ -1.87
Ubp1Q811S7 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.35□□□□□ -1.87
Ubp1Q811S7 AC132221.1-201ENSMUST00000220577 3841 ntBASIC3.34□□□□□ -1.87
Ubp1Q811S7 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ubp1Q811S7 Gm26293-201ENSMUST00000104170 84 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 187.9 ms