Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm22433-201ENSMUST00000158550 142 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Mir7578-201ENSMUST00000183455 82 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Mir6926-201ENSMUST00000184562 68 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm45508-201ENSMUST00000209298 299 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm9795-201ENSMUST00000062156 693 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm14803-201ENSMUST00000117163 361 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm12550-201ENSMUST00000118478 329 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm6829-201ENSMUST00000119858 360 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm13729-201ENSMUST00000120328 406 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm25805-201ENSMUST00000122788 108 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm22792-201ENSMUST00000157225 133 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm22483-201ENSMUST00000157986 274 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm25373-201ENSMUST00000158156 115 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm25718-201ENSMUST00000158632 118 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm25362-201ENSMUST00000158854 105 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm23864-201ENSMUST00000177607 107 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm44853-201ENSMUST00000209070 250 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm19118-201ENSMUST00000222554 98 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Gm22978-201ENSMUST00000082607 160 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Mir128-1-201ENSMUST00000083586 70 ntBASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Upk3bQ80YF6 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm14845-201ENSMUST00000121259 306 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm26105-201ENSMUST00000157253 190 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm25390-201ENSMUST00000157341 103 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm22537-201ENSMUST00000158172 199 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm22093-201ENSMUST00000158980 111 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm7592-201ENSMUST00000160674 627 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm20660-201ENSMUST00000177515 289 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm29452-201ENSMUST00000187996 313 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm28848-201ENSMUST00000189984 168 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm37162-201ENSMUST00000191708 551 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm24457-201ENSMUST00000083196 105 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm23039-201ENSMUST00000083870 161 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Upk3bQ80YF6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.85□□□□□ -2.11
Upk3bQ80YF6 Gm14922-201ENSMUST00000121131 163 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm26479-201ENSMUST00000122620 106 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm23469-201ENSMUST00000157131 104 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm25720-201ENSMUST00000157503 105 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm26024-201ENSMUST00000158657 322 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm28453-203ENSMUST00000187041 189 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm37746-201ENSMUST00000193249 198 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Trbv18-201ENSMUST00000194256 294 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Upk3bQ80YF6 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm25482-201ENSMUST00000083225 107 ntBASIC1.84□□□□□ -2.11
Upk3bQ80YF6 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.84□□□□□ -2.12
Upk3bQ80YF6 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm22784-201ENSMUST00000104088 132 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm24282-201ENSMUST00000104232 66 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Mir466h-201ENSMUST00000104748 81 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm22151-201ENSMUST00000116963 58 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm14073-201ENSMUST00000117344 381 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm22800-201ENSMUST00000175627 94 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm21827-201ENSMUST00000178247 423 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Mir3535-201ENSMUST00000197651 147 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm7065-201ENSMUST00000222150 474 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm26225-201ENSMUST00000082508 135 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm24204-201ENSMUST00000082950 107 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm25402-201ENSMUST00000082966 131 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Snora69-201ENSMUST00000083708 131 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Upk3bQ80YF6 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.82□□□□□ -2.12
Upk3bQ80YF6 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.82□□□□□ -2.12
Upk3bQ80YF6 Gm12897-201ENSMUST00000120341 250 ntBASIC1.82□□□□□ -2.12
Upk3bQ80YF6 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.82□□□□□ -2.12
Upk3bQ80YF6 Gm23535-201ENSMUST00000157542 106 ntBASIC1.82□□□□□ -2.12
Upk3bQ80YF6 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 140.5 ms