Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Mdga2-203ENSMUST00000113942 423 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm14774-201ENSMUST00000117857 536 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm14782-201ENSMUST00000120151 195 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm15281-201ENSMUST00000125181 351 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm22598-201ENSMUST00000157600 127 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm24304-201ENSMUST00000177635 107 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm24388-201ENSMUST00000177872 107 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm25457-201ENSMUST00000179509 107 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm23003-201ENSMUST00000179948 107 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm44373-201ENSMUST00000196112 169 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Mir7661-201ENSMUST00000197023 61 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm26922-201ENSMUST00000082687 72 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm26329-201ENSMUST00000093723 110 ntBASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trim58Q5NCC9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm25625-201ENSMUST00000157221 96 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm22945-201ENSMUST00000158557 157 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm37889-201ENSMUST00000194174 251 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm44337-201ENSMUST00000196553 114 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trim58Q5NCC9 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm23970-201ENSMUST00000083319 107 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Gm25896-201ENSMUST00000083713 136 ntBASIC1.98□□□□□ -2.09
Trim58Q5NCC9 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm15010-201ENSMUST00000117153 407 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm22316-201ENSMUST00000158012 216 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm24308-201ENSMUST00000177773 114 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Mir6406-201ENSMUST00000183592 120 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm28257-201ENSMUST00000185244 463 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm43676-201ENSMUST00000197532 540 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Mir7118-201ENSMUST00000197760 61 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm26107-201ENSMUST00000083972 107 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trim58Q5NCC9 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.97□□□□□ -2.09
Trim58Q5NCC9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trim58Q5NCC9 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm15379-201ENSMUST00000121224 648 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm15692-201ENSMUST00000152173 352 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm22101-201ENSMUST00000157928 103 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm24394-201ENSMUST00000158141 123 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm22114-201ENSMUST00000177756 107 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Mir7026-201ENSMUST00000184384 67 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm43250-201ENSMUST00000196536 273 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm43583-201ENSMUST00000199235 303 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm44353-201ENSMUST00000200618 138 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm43978-201ENSMUST00000203491 451 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Gm44858-201ENSMUST00000207360 154 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Trim58Q5NCC9 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trim58Q5NCC9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm12837-201ENSMUST00000120131 373 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm25012-201ENSMUST00000158396 164 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm23579-201ENSMUST00000158528 103 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm24222-201ENSMUST00000158834 93 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm25836-201ENSMUST00000158918 123 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Mir6355-201ENSMUST00000183687 106 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm28288-201ENSMUST00000191019 214 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Mir376a-201ENSMUST00000197584 68 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm43035-201ENSMUST00000197626 517 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Gm45207-201ENSMUST00000207469 145 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
Trim58Q5NCC9 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm25485-201ENSMUST00000104120 132 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm9059-201ENSMUST00000118319 183 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm12647-201ENSMUST00000118977 265 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm22800-201ENSMUST00000175627 94 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm24618-201ENSMUST00000177718 94 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm23953-201ENSMUST00000178214 94 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm26332-201ENSMUST00000179813 94 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Gm22863-201ENSMUST00000180265 94 ntBASIC1.94□□□□□ -2.1
Trim58Q5NCC9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 148.3 ms