Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm27510-201ENSMUST00000158214 64 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm25413-201ENSMUST00000158544 312 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm43556-201ENSMUST00000196186 681 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm44337-201ENSMUST00000196553 114 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm45658-201ENSMUST00000209197 580 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm5899-201ENSMUST00000071770 270 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm13992-201ENSMUST00000120558 156 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm8121-201ENSMUST00000153583 499 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm23329-201ENSMUST00000157415 108 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm25768-201ENSMUST00000158570 98 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm24154-201ENSMUST00000175261 130 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm22308-201ENSMUST00000177609 107 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm28409-201ENSMUST00000187064 103 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm44142-201ENSMUST00000203358 311 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm24623-201ENSMUST00000082616 194 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Snord96a-201ENSMUST00000082791 81 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Mir22-201ENSMUST00000083595 95 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm25896-201ENSMUST00000083713 136 ntBASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Upf3bQ3ULL6 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm26384-201ENSMUST00000102183 110 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm26149-201ENSMUST00000157432 108 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm24726-201ENSMUST00000158232 121 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm26501-201ENSMUST00000178307 107 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm22631-201ENSMUST00000179656 94 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm23523-201ENSMUST00000180190 107 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Gm38261-201ENSMUST00000192608 316 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.09□□□□□ -2.23
Upf3bQ3ULL6 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm25543-201ENSMUST00000122678 312 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm22228-201ENSMUST00000157364 101 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm23535-201ENSMUST00000157542 106 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm27385-201ENSMUST00000184747 104 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm29167-201ENSMUST00000190024 377 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm42834-201ENSMUST00000196845 256 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm45268-201ENSMUST00000210046 370 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.08□□□□□ -2.24
Upf3bQ3ULL6 Gm23705-201ENSMUST00000104370 130 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm24379-201ENSMUST00000122695 86 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm23390-201ENSMUST00000157393 106 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm24191-201ENSMUST00000157977 122 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm26213-201ENSMUST00000158582 110 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm17100-201ENSMUST00000168963 272 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Mir3968-201ENSMUST00000175355 100 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm27660-201ENSMUST00000184028 208 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm27894-201ENSMUST00000184177 92 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Mir195b-201ENSMUST00000184814 97 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Mir7059-201ENSMUST00000184825 59 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm5010-201ENSMUST00000213131 260 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm35558-203ENSMUST00000222264 204 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm25038-201ENSMUST00000082928 130 ntBASIC1.07□□□□□ -2.24
Upf3bQ3ULL6 Gm23277-201ENSMUST00000157914 136 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm24942-201ENSMUST00000158328 114 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm23760-201ENSMUST00000158350 116 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm24315-201ENSMUST00000177835 127 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm22129-201ENSMUST00000179034 107 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm27421-201ENSMUST00000184729 167 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm25651-201ENSMUST00000083782 119 ntBASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Upf3bQ3ULL6 Gm9059-201ENSMUST00000118319 183 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm25054-201ENSMUST00000157370 97 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm25491-201ENSMUST00000158733 308 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28110-201ENSMUST00000185782 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29057-201ENSMUST00000186468 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28737-201ENSMUST00000186808 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29147-201ENSMUST00000186846 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29118-201ENSMUST00000186908 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm28433-201ENSMUST00000187085 315 ntBASIC1.05□□□□□ -2.24
Upf3bQ3ULL6 Gm29227-201ENSMUST00000187139 315 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms