Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm25707-201ENSMUST00000175120 96 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gm43193-201ENSMUST00000197732 441 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Mir3068-202ENSMUST00000197755 79 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gm19118-201ENSMUST00000222554 98 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gm9795-201ENSMUST00000062156 693 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gm24356-201ENSMUST00000082859 106 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.03□□□□□ -2.08
Ssbp4Q3U4B1 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Ssbp4Q3U4B1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Ssbp4Q3U4B1 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Mir1b-201ENSMUST00000117012 122 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm14073-201ENSMUST00000117344 381 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm22984-201ENSMUST00000122751 122 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm23599-201ENSMUST00000157261 251 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm25333-201ENSMUST00000158035 246 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Mir5118-201ENSMUST00000175551 67 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm22118-201ENSMUST00000175593 171 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm27220-201ENSMUST00000183453 262 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Mir6336-201ENSMUST00000183581 130 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm37089-201ENSMUST00000195616 129 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm5899-201ENSMUST00000071770 270 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm6030-201ENSMUST00000078768 402 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm22866-201ENSMUST00000083947 177 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.02□□□□□ -2.09
Ssbp4Q3U4B1 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm24116-201ENSMUST00000103975 107 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm25316-201ENSMUST00000116826 118 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm22151-201ENSMUST00000116963 58 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm14803-201ENSMUST00000117163 361 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm12686-201ENSMUST00000120546 397 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm5396-201ENSMUST00000121222 532 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm25392-201ENSMUST00000157335 297 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm23589-201ENSMUST00000157660 105 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm24818-201ENSMUST00000175093 161 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm22192-201ENSMUST00000175128 85 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm21827-201ENSMUST00000178247 423 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm3852-201ENSMUST00000182781 264 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm2077-201ENSMUST00000195017 319 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Mir376a-201ENSMUST00000197584 68 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm44429-201ENSMUST00000203542 186 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm25632-201ENSMUST00000083112 85 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Gm23247-201ENSMUST00000083373 107 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ssbp4Q3U4B1 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Mir881-201ENSMUST00000104844 78 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm22027-201ENSMUST00000122737 127 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm23223-201ENSMUST00000158119 127 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm24210-201ENSMUST00000158263 133 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm27399-201ENSMUST00000184250 78 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm27545-201ENSMUST00000184755 202 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm37557-201ENSMUST00000191640 139 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Gm38311-201ENSMUST00000192945 165 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Mir378a-201ENSMUST00000198300 66 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 AC115735.2-201ENSMUST00000227135 351 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2□□□□□ -2.09
Ssbp4Q3U4B1 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ssbp4Q3U4B1 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 644.1 ms