Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm25051-201ENSMUST00000158602 249 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nkx2-6P43688 Mir3103-201ENSMUST00000175474 67 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm25615-201ENSMUST00000177836 94 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm27220-201ENSMUST00000183453 262 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm28900-201ENSMUST00000185232 156 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm28848-201ENSMUST00000189984 168 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm15235-201ENSMUST00000200572 194 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm18213-201ENSMUST00000207850 178 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.57□□□□□ -2
Nkx2-6P43688 Mir146-201ENSMUST00000083667 65 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Gm24762-201ENSMUST00000083689 104 ntBASIC2.57□□□□□ -2
Nkx2-6P43688 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Nkx2-6P43688 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Nkx2-6P43688 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-6P43688 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Nkx2-6P43688 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Nkx2-6P43688 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Nkx2-6P43688 Gm24594-201ENSMUST00000122502 99 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm25269-201ENSMUST00000122601 104 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm22381-201ENSMUST00000158186 107 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm20718-201ENSMUST00000176058 259 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Mir6386-201ENSMUST00000183558 104 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm27465-201ENSMUST00000184290 91 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Mir7050-201ENSMUST00000184636 60 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm27330-201ENSMUST00000184689 132 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm18341-201ENSMUST00000197538 622 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.56□□□□□ -2
Nkx2-6P43688 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Snord7-201ENSMUST00000083781 97 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.56□□□□□ -2
Nkx2-6P43688 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Mir682-201ENSMUST00000102281 96 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm23990-201ENSMUST00000117031 117 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm14803-201ENSMUST00000117163 361 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm6829-201ENSMUST00000119858 360 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm25476-201ENSMUST00000175125 185 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm7329-201ENSMUST00000185915 210 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm29005-201ENSMUST00000186773 320 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm32175-201ENSMUST00000193641 346 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Mir465d-201ENSMUST00000196314 58 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.55□□□□□ -2
Nkx2-6P43688 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.55□□□□□ -2
Nkx2-6P43688 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm23803-201ENSMUST00000104610 132 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm12443-201ENSMUST00000122308 323 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm22560-201ENSMUST00000157332 120 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm22883-201ENSMUST00000157376 106 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm22097-201ENSMUST00000157929 278 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm17020-201ENSMUST00000172274 274 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm43749-201ENSMUST00000199345 352 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm44256-201ENSMUST00000203304 335 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Gm45288-201ENSMUST00000210236 151 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Mir208a-201ENSMUST00000083498 83 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Mir137-201ENSMUST00000083635 73 ntBASIC2.54□□□□□ -2
Nkx2-6P43688 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-6P43688 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Nkx2-6P43688 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-6P43688 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-6P43688 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
Nkx2-6P43688 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Nkx2-6P43688 Gm24282-201ENSMUST00000104232 66 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm26247-201ENSMUST00000116702 91 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm26473-201ENSMUST00000116763 127 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm22316-201ENSMUST00000158012 216 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm25223-201ENSMUST00000158200 110 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm25863-201ENSMUST00000158249 329 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.53□□□□□ -2
Nkx2-6P43688 Mir7014-201ENSMUST00000183853 63 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm27761-201ENSMUST00000184091 131 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Trbv7-201ENSMUST00000193339 402 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm20144-201ENSMUST00000203031 165 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Gm23847-201ENSMUST00000083829 110 ntBASIC2.53□□□□□ -2
Nkx2-6P43688 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Nkx2-6P43688 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Nkx2-6P43688 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm23331-201ENSMUST00000157423 108 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Mir3076-201ENSMUST00000175415 60 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm19257-201ENSMUST00000186121 183 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm43427-201ENSMUST00000198188 331 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm43901-201ENSMUST00000203247 453 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm5002-201ENSMUST00000207145 223 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm18188-201ENSMUST00000219386 478 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm22622-201ENSMUST00000082870 129 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm10360-201ENSMUST00000097219 272 ntBASIC2.52□□□□□ -2.01
Nkx2-6P43688 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms