Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Gm25933-201ENSMUST00000178943 108 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Gm27991-201ENSMUST00000184804 137 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Gm27544-201ENSMUST00000185069 155 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Gm37713-201ENSMUST00000191746 198 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Mir7215-201ENSMUST00000200383 51 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Gm44473-201ENSMUST00000204039 152 ntBASIC2.13□□□□□ -2.07
Msh3P13705 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.13□□□□□ -2.07
Msh3P13705 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.13□□□□□ -2.07
Msh3P13705 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Msh3P13705 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Msh3P13705 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Msh3P13705 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm24480-201ENSMUST00000157442 103 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm24053-201ENSMUST00000158620 105 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm23355-201ENSMUST00000177614 107 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm23148-201ENSMUST00000180367 107 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm37557-201ENSMUST00000191640 139 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Trbv6-201ENSMUST00000193743 276 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm45791-201ENSMUST00000212908 352 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm23406-201ENSMUST00000082537 122 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm25813-201ENSMUST00000082748 191 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm25402-201ENSMUST00000082966 131 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm25258-201ENSMUST00000083049 107 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm25793-201ENSMUST00000083287 107 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm24764-201ENSMUST00000083686 199 ntBASIC2.12□□□□□ -2.07
Msh3P13705 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Gm24630-201ENSMUST00000122768 106 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Msh3P13705 Gm23759-201ENSMUST00000158351 268 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Gm24358-201ENSMUST00000158424 288 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.11□□□□□ -2.07
Msh3P13705 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
Msh3P13705 Gm29665-201ENSMUST00000191457 528 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Mir7217-201ENSMUST00000200304 62 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Mir7227-201ENSMUST00000200408 59 ntBASIC2.11□□□□□ -2.07
Msh3P13705 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Gm22154-201ENSMUST00000083844 131 ntBASIC2.11□□□□□ -2.07
Msh3P13705 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Msh3P13705 Gm22151-201ENSMUST00000116963 58 ntBASIC2.1□□□□□ -2.07
Msh3P13705 Mir1b-201ENSMUST00000117012 122 ntBASIC2.1□□□□□ -2.07
Msh3P13705 Gm13992-201ENSMUST00000120558 156 ntBASIC2.1□□□□□ -2.07
Msh3P13705 Gm22535-201ENSMUST00000158174 119 ntBASIC2.1□□□□□ -2.07
Msh3P13705 Gm23813-201ENSMUST00000175153 77 ntBASIC2.1□□□□□ -2.07
Msh3P13705 Gm21827-201ENSMUST00000178247 423 ntBASIC2.1□□□□□ -2.07
Msh3P13705 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.1□□□□□ -2.07
Msh3P13705 Gm24356-201ENSMUST00000082859 106 ntBASIC2.1□□□□□ -2.07
Msh3P13705 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm12351-201ENSMUST00000118727 292 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm11572-201ENSMUST00000119164 120 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm23214-201ENSMUST00000122716 157 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm25805-201ENSMUST00000122788 108 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm25711-201ENSMUST00000158633 128 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm22448-201ENSMUST00000179254 107 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Mir6376-201ENSMUST00000185149 131 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm29147-201ENSMUST00000186846 315 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm29227-201ENSMUST00000187139 315 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm29034-201ENSMUST00000188099 315 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm29167-201ENSMUST00000190024 377 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm28160-201ENSMUST00000191229 315 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm19901-201ENSMUST00000192191 495 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm37129-201ENSMUST00000195791 315 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm45616-201ENSMUST00000211711 319 ntBASIC2.09□□□□□ -2.07
Msh3P13705 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Msh3P13705 Gm24460-201ENSMUST00000082731 106 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Gm23378-201ENSMUST00000082942 107 ntBASIC2.09□□□□□ -2.07
Msh3P13705 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Msh3P13705 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
Msh3P13705 Gm24049-201ENSMUST00000102409 100 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Msh3P13705 Gm25090-201ENSMUST00000104000 132 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm12926-201ENSMUST00000121158 409 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm24896-201ENSMUST00000122741 135 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.08□□□□□ -2.08
Msh3P13705 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.08□□□□□ -2.08
Msh3P13705 Gm44794-201ENSMUST00000206550 411 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm45296-201ENSMUST00000209625 205 ntBASIC2.08□□□□□ -2.08
Msh3P13705 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.08□□□□□ -2.08
Msh3P13705 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm25078-201ENSMUST00000082530 107 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Mir222-201ENSMUST00000083537 79 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm23845-201ENSMUST00000083834 152 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm22866-201ENSMUST00000083947 177 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Msh3P13705 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.08□□□□□ -2.08
Msh3P13705 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm26077-201ENSMUST00000104064 123 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm6829-201ENSMUST00000119858 360 ntBASIC2.07□□□□□ -2.08
Msh3P13705 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm25961-201ENSMUST00000157174 135 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm22814-201ENSMUST00000157452 104 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm23474-201ENSMUST00000158884 75 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm25450-201ENSMUST00000179144 107 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Mir7021-201ENSMUST00000197026 63 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm44256-201ENSMUST00000203304 335 ntBASIC2.07□□□□□ -2.08
Msh3P13705 Gm44666-201ENSMUST00000208544 391 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms