Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm14785-201ENSMUST00000120185 539 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm24306-201ENSMUST00000180229 79 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm29613-201ENSMUST00000185846 313 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm29544-201ENSMUST00000188860 313 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm28808-201ENSMUST00000190978 313 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm42475-201ENSMUST00000201212 295 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm25404-201ENSMUST00000082970 107 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Snora3-201ENSMUST00000083082 132 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm24490-201ENSMUST00000083803 98 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm3867-201ENSMUST00000086108 279 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm22591-201ENSMUST00000104243 106 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm15861-201ENSMUST00000120979 339 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm22221-201ENSMUST00000157362 103 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm24401-201ENSMUST00000157868 91 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm22163-201ENSMUST00000158408 135 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm27640-201ENSMUST00000184580 147 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm25896-201ENSMUST00000083713 136 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm25651-201ENSMUST00000083782 119 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
Cacna1bO55017 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Cacna1bO55017 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm12806-201ENSMUST00000119384 268 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm23184-201ENSMUST00000122594 131 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm22537-201ENSMUST00000158172 199 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm23619-201ENSMUST00000178411 94 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm25474-201ENSMUST00000179052 94 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm22047-201ENSMUST00000179176 94 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm23862-201ENSMUST00000180342 94 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Cacna1bO55017 Gm35736-201ENSMUST00000203681 313 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Mir16-2-201ENSMUST00000083672 95 ntBASIC0.58□□□□□ -2.32
Cacna1bO55017 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.58□□□□□ -2.32
Cacna1bO55017 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm25384-201ENSMUST00000157807 105 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm25772-201ENSMUST00000158574 56 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm21894-201ENSMUST00000179631 546 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm9156-201ENSMUST00000189660 463 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm43114-201ENSMUST00000198298 343 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm29848-201ENSMUST00000203107 295 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm44910-201ENSMUST00000208451 396 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm40810-201ENSMUST00000219149 253 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm24707-201ENSMUST00000082812 107 ntBASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Cacna1bO55017 Gm15266-201ENSMUST00000119635 255 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm16265-201ENSMUST00000134558 108 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm23589-201ENSMUST00000157660 105 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Rnu7-201ENSMUST00000158458 62 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm27490-201ENSMUST00000184754 128 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm44654-201ENSMUST00000208052 329 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 AC121844.1-201ENSMUST00000218706 137 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
Cacna1bO55017 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm25683-201ENSMUST00000083940 131 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm25991-201ENSMUST00000102439 99 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm23907-201ENSMUST00000104595 189 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm26405-201ENSMUST00000158495 100 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm9593-201ENSMUST00000166034 469 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm24862-201ENSMUST00000179103 79 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm23310-201ENSMUST00000179105 79 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm25461-201ENSMUST00000179293 79 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm37438-201ENSMUST00000192813 393 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm34073-201ENSMUST00000195736 212 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm43583-201ENSMUST00000199235 303 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm45207-201ENSMUST00000207469 145 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm25589-201ENSMUST00000082502 166 ntBASIC0.56□□□□□ -2.32
Cacna1bO55017 Gm25317-201ENSMUST00000116824 129 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm14972-201ENSMUST00000121780 364 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm25784-201ENSMUST00000122524 81 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm23981-201ENSMUST00000157136 106 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm23124-201ENSMUST00000157650 107 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm22944-201ENSMUST00000158662 133 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm17100-201ENSMUST00000168963 272 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm25670-201ENSMUST00000178423 107 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Gm26239-201ENSMUST00000178842 107 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.55□□□□□ -2.32
Cacna1bO55017 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms