Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm23858-201ENSMUST00000158384 106 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm23022-201ENSMUST00000158768 180 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm25956-201ENSMUST00000175115 217 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Mir6381-201ENSMUST00000183426 87 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm37128-201ENSMUST00000192599 232 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm18971-201ENSMUST00000197240 374 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm44429-201ENSMUST00000203542 186 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm22997-201ENSMUST00000082845 107 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm23453-201ENSMUST00000083326 106 ntBASIC1.12□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm14923-201ENSMUST00000118270 155 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24896-201ENSMUST00000122741 135 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm22338-201ENSMUST00000157715 129 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24726-201ENSMUST00000158232 121 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm21737-201ENSMUST00000178112 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm21815-201ENSMUST00000178213 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm21729-201ENSMUST00000180058 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm21853-201ENSMUST00000180071 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm20901-201ENSMUST00000180177 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm29397-201ENSMUST00000185205 333 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm29495-201ENSMUST00000189319 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm28090-201ENSMUST00000189458 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm21647-201ENSMUST00000189755 664 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm44446-201ENSMUST00000204864 255 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24623-201ENSMUST00000082616 194 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm22299-201ENSMUST00000082663 136 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Mir429-201ENSMUST00000083493 83 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm10360-201ENSMUST00000097219 272 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24837-201ENSMUST00000158683 81 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm27539-201ENSMUST00000184971 224 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Mir3961-201ENSMUST00000198795 59 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm18854-201ENSMUST00000211196 329 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm26066-201ENSMUST00000083385 109 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Rny1-201ENSMUST00000083767 112 ntBASIC1.11□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm12770-201ENSMUST00000121734 462 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24895-201ENSMUST00000122742 74 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm25253-201ENSMUST00000179958 107 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm27624-201ENSMUST00000185047 177 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24338-201ENSMUST00000104205 127 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm23983-201ENSMUST00000157142 114 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24551-201ENSMUST00000158645 92 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm24388-201ENSMUST00000177872 107 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm38395-201ENSMUST00000199904 830 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm44655-201ENSMUST00000207768 423 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Snord68-201ENSMUST00000082516 86 ntBASIC1.1□□□□□ -2.23
Scn2aA0A0J9YTW6 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm25269-201ENSMUST00000122601 104 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm22136-201ENSMUST00000158751 268 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Mir7063-201ENSMUST00000184158 91 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm5001-201ENSMUST00000204361 331 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm45704-201ENSMUST00000212582 403 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm25589-201ENSMUST00000082502 166 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm22972-201ENSMUST00000083297 131 ntBASIC1.09□□□□□ -2.24
Scn2aA0A0J9YTW6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm6956-201ENSMUST00000134724 546 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm23660-201ENSMUST00000178362 79 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm24088-201ENSMUST00000179100 79 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Mir6341-201ENSMUST00000183490 121 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm44010-201ENSMUST00000204432 331 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm2829-201ENSMUST00000213121 499 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm19441-201ENSMUST00000221545 330 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm11835-201ENSMUST00000120635 663 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm24915-201ENSMUST00000157288 78 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm22654-201ENSMUST00000157874 105 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Gm29005-201ENSMUST00000186773 320 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Snord118-201ENSMUST00000082965 135 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Mir196b-201ENSMUST00000083509 85 ntBASIC1.08□□□□□ -2.24
Scn2aA0A0J9YTW6 Mir10b-201ENSMUST00000083566 68 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms