Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm24153-201ENSMUST00000179280 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm25597-201ENSMUST00000179388 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm25816-201ENSMUST00000179764 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm26188-201ENSMUST00000179963 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm26433-201ENSMUST00000180227 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm22128-201ENSMUST00000180346 94 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm10105-201ENSMUST00000184601 270 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm43238-201ENSMUST00000196463 359 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm43529-201ENSMUST00000199178 412 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm43978-201ENSMUST00000203491 451 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm44825-201ENSMUST00000207557 150 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm44598-201ENSMUST00000207566 150 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm25929-201ENSMUST00000082784 107 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm26263-201ENSMUST00000083281 164 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm23247-201ENSMUST00000083373 107 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm25937-201ENSMUST00000083912 107 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm26107-201ENSMUST00000083972 107 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Col4a4Q9QZR9 Gm11854-201ENSMUST00000117839 446 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm26256-201ENSMUST00000122499 186 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm22479-201ENSMUST00000122566 81 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Mir1898-201ENSMUST00000122643 83 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm23752-201ENSMUST00000157584 115 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm22328-201ENSMUST00000158074 112 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm22435-201ENSMUST00000158552 128 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm24577-201ENSMUST00000158580 63 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm25715-201ENSMUST00000158627 125 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm28724-201ENSMUST00000186149 625 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm43402-201ENSMUST00000197159 159 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm44409-201ENSMUST00000198810 166 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm42594-201ENSMUST00000199511 246 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm43955-201ENSMUST00000204332 142 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm45268-201ENSMUST00000210046 370 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.36□□□□□ -2.19
Col4a4Q9QZR9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm23991-201ENSMUST00000117033 93 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm26278-201ENSMUST00000157098 132 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm22098-201ENSMUST00000157930 85 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm23008-201ENSMUST00000158946 80 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm8207-201ENSMUST00000171204 502 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm26501-201ENSMUST00000178307 107 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm22448-201ENSMUST00000179254 107 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm28058-201ENSMUST00000186421 264 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm20058-201ENSMUST00000186939 284 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm44462-201ENSMUST00000199696 129 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm43284-201ENSMUST00000200103 253 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm18854-201ENSMUST00000211196 329 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm17990-201ENSMUST00000211728 553 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm7692-201ENSMUST00000213534 409 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Olfr197-201ENSMUST00000080031 926 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm24037-201ENSMUST00000082871 180 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm26156-201ENSMUST00000116999 123 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm11784-201ENSMUST00000118568 474 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm24596-201ENSMUST00000122504 107 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm16362-201ENSMUST00000135189 214 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm24584-201ENSMUST00000157972 107 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm22389-201ENSMUST00000158193 301 ntBASIC1.35□□□□□ -2.19
Col4a4Q9QZR9 Gm25211-201ENSMUST00000177553 107 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms