Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm28740-201ENSMUST00000186142 215 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm29005-201ENSMUST00000186773 320 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm43810-201ENSMUST00000201018 232 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm23299-201ENSMUST00000082708 79 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm11358-201ENSMUST00000122310 373 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm22233-201ENSMUST00000157464 114 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm24808-201ENSMUST00000157993 118 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm25868-201ENSMUST00000158253 114 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm16038-201ENSMUST00000159317 193 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm9593-201ENSMUST00000166034 469 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm17100-201ENSMUST00000168963 272 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm22929-201ENSMUST00000175517 107 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm24418-201ENSMUST00000177597 79 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm21815-201ENSMUST00000178213 664 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm20874-201ENSMUST00000178356 663 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm9830-201ENSMUST00000178509 357 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm24639-201ENSMUST00000178518 79 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm22851-201ENSMUST00000178741 94 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm25074-201ENSMUST00000178782 94 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm23076-201ENSMUST00000179082 79 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm25077-201ENSMUST00000179157 79 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm28344-201ENSMUST00000185704 279 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm20118-201ENSMUST00000187207 162 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm19901-201ENSMUST00000192191 495 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Gm35212-201ENSMUST00000196672 606 ntBASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Rpa3Q9CQ71 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm24172-201ENSMUST00000104127 117 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm24282-201ENSMUST00000104232 66 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm13396-201ENSMUST00000120617 271 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm22654-201ENSMUST00000157874 105 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm25491-201ENSMUST00000158733 308 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm23725-201ENSMUST00000177876 107 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm27659-201ENSMUST00000183472 98 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm27640-201ENSMUST00000184580 147 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm37089-201ENSMUST00000195616 129 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm25820-201ENSMUST00000198589 127 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm24268-201ENSMUST00000082990 110 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Gm25651-201ENSMUST00000083782 119 ntBASIC0.84□□□□□ -2.27
Rpa3Q9CQ71 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.28
Rpa3Q9CQ71 Mir190b-201ENSMUST00000104803 80 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm14007-201ENSMUST00000118288 210 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm12432-201ENSMUST00000119540 186 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm24517-201ENSMUST00000122560 107 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm22328-201ENSMUST00000158074 112 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Mir1954-201ENSMUST00000175595 86 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm24020-201ENSMUST00000180156 108 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm26652-202ENSMUST00000181672 475 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm27660-201ENSMUST00000184028 208 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm29661-201ENSMUST00000186781 315 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm29308-201ENSMUST00000188863 315 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm44337-201ENSMUST00000196553 114 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Mir691-201ENSMUST00000199719 78 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm18854-201ENSMUST00000211196 329 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm5010-201ENSMUST00000213131 260 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm5899-201ENSMUST00000071770 270 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm26224-201ENSMUST00000082506 80 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Gm25404-201ENSMUST00000082970 107 ntBASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.83□□□□□ -2.28
Rpa3Q9CQ71 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm25317-201ENSMUST00000116824 129 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm16242-201ENSMUST00000117741 334 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm23111-201ENSMUST00000122652 105 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm24221-201ENSMUST00000158833 313 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm23777-201ENSMUST00000158994 259 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm23419-201ENSMUST00000175523 84 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm21894-201ENSMUST00000179631 546 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm37801-201ENSMUST00000194754 274 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm43556-201ENSMUST00000196186 681 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm9251-201ENSMUST00000197202 628 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm17906-201ENSMUST00000202480 901 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Gm22572-201ENSMUST00000082985 105 ntBASIC0.82□□□□□ -2.28
Rpa3Q9CQ71 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Rpa3Q9CQ71 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.81□□□□□ -2.28
Rpa3Q9CQ71 Gm24338-201ENSMUST00000104205 127 ntBASIC0.81□□□□□ -2.28
Rpa3Q9CQ71 Gm22591-201ENSMUST00000104243 106 ntBASIC0.81□□□□□ -2.28
Rpa3Q9CQ71 Gm26301-201ENSMUST00000104813 95 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 263.7 ms