Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm25401-201ENSMUST00000082975 106 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Mir541-201ENSMUST00000102097 90 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Mir682-201ENSMUST00000102281 96 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm22658-201ENSMUST00000104196 155 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm12550-201ENSMUST00000118478 329 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm12155-201ENSMUST00000121267 160 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm15986-201ENSMUST00000122153 400 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm24436-201ENSMUST00000157889 302 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm21827-201ENSMUST00000178247 423 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm25939-201ENSMUST00000179876 191 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm27532-201ENSMUST00000183726 113 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Mir6399-201ENSMUST00000184050 84 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm29262-201ENSMUST00000190084 196 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm44903-201ENSMUST00000206840 130 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm45508-201ENSMUST00000209298 299 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Gm45288-201ENSMUST00000210236 151 ntBASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Brf1Q8CFK2 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm24867-201ENSMUST00000104161 107 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm26341-201ENSMUST00000104561 134 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm26249-201ENSMUST00000116708 118 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm22713-201ENSMUST00000116895 130 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm9009-201ENSMUST00000117321 326 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm2962-201ENSMUST00000159266 336 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm7592-201ENSMUST00000160674 627 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm22259-201ENSMUST00000178926 107 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.04□□□□□ -1.92
Brf1Q8CFK2 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm44459-201ENSMUST00000203926 160 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm44223-201ENSMUST00000204854 114 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm44533-201ENSMUST00000207782 268 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.04□□□□□ -1.92
Brf1Q8CFK2 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm25625-201ENSMUST00000157221 96 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm22145-201ENSMUST00000157396 148 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm24922-201ENSMUST00000158511 102 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm23864-201ENSMUST00000177607 107 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm23002-201ENSMUST00000179221 107 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm25457-201ENSMUST00000179509 107 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm17067-202ENSMUST00000180131 123 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Mir7013-201ENSMUST00000183540 72 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm27527-201ENSMUST00000183903 99 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm29005-201ENSMUST00000186773 320 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm22299-201ENSMUST00000082663 136 ntBASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Brf1Q8CFK2 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
Brf1Q8CFK2 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Brf1Q8CFK2 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm24126-201ENSMUST00000104111 106 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm12797-201ENSMUST00000118645 273 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm14215-201ENSMUST00000120578 221 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm24911-201ENSMUST00000157292 136 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm23588-201ENSMUST00000157659 99 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm25615-201ENSMUST00000177836 94 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Gm25020-201ENSMUST00000178071 107 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.02□□□□□ -1.93
Brf1Q8CFK2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm23836-201ENSMUST00000104434 129 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Mir878-201ENSMUST00000104680 78 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm6574-201ENSMUST00000120037 362 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm14922-201ENSMUST00000121131 163 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm24006-201ENSMUST00000158462 132 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm26265-202ENSMUST00000196326 133 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm25930-201ENSMUST00000082785 107 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.01□□□□□ -1.93
Brf1Q8CFK2 Gm24121-201ENSMUST00000102029 106 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm12351-201ENSMUST00000118727 292 ntBASIC3□□□□□ -1.93
Brf1Q8CFK2 Gm12721-201ENSMUST00000120621 268 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 179 ms