Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm22382-201ENSMUST00000158185 130 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm23545-201ENSMUST00000158205 104 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm25866-201ENSMUST00000158245 112 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm23759-201ENSMUST00000158351 268 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm23921-201ENSMUST00000175258 107 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm24388-201ENSMUST00000177872 107 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm25457-201ENSMUST00000179509 107 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Mir6975-201ENSMUST00000184879 61 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Trbv6-201ENSMUST00000193743 276 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Mir323-201ENSMUST00000083683 86 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm25896-201ENSMUST00000083713 136 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Rny1-201ENSMUST00000083767 112 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Gm22866-201ENSMUST00000083947 177 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Upk3bQ80YF6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm23705-201ENSMUST00000104370 130 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm26249-201ENSMUST00000116708 118 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm12513-201ENSMUST00000118617 352 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm12797-201ENSMUST00000118645 273 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm12304-201ENSMUST00000120312 385 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm5396-201ENSMUST00000121222 532 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm26005-201ENSMUST00000158802 134 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm25121-201ENSMUST00000179846 79 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm28921-201ENSMUST00000190219 378 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm37104-201ENSMUST00000193278 196 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm44966-201ENSMUST00000208096 157 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm22062-201ENSMUST00000082563 107 ntBASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Upk3bQ80YF6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Upk3bQ80YF6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm25565-201ENSMUST00000104605 105 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm26247-201ENSMUST00000116702 91 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm13992-201ENSMUST00000120558 156 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm24937-201ENSMUST00000122597 134 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm25625-201ENSMUST00000157221 96 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm24909-201ENSMUST00000157290 280 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm22316-201ENSMUST00000158012 216 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm22447-201ENSMUST00000158155 92 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm17100-201ENSMUST00000168963 272 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm25020-201ENSMUST00000178071 107 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm29604-201ENSMUST00000187176 163 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm45791-201ENSMUST00000212908 352 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Upk3bQ80YF6 Gm22752-201ENSMUST00000102083 109 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm25875-201ENSMUST00000104323 107 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm12686-201ENSMUST00000120546 397 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm22984-201ENSMUST00000122751 122 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm23865-201ENSMUST00000157723 97 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm23640-201ENSMUST00000157860 104 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm24958-201ENSMUST00000158009 97 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm23258-201ENSMUST00000158319 106 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm25939-201ENSMUST00000179876 191 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm45907-201ENSMUST00000213023 193 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm22249-201ENSMUST00000082485 136 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm24042-201ENSMUST00000083114 103 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Gm22169-201ENSMUST00000083229 107 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Upk3bQ80YF6 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm24127-201ENSMUST00000104110 130 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Mir872-201ENSMUST00000104728 81 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm13432-201ENSMUST00000118861 241 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm12721-201ENSMUST00000120621 268 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm23324-201ENSMUST00000157421 131 ntBASIC1.87□□□□□ -2.11
Upk3bQ80YF6 Gm22215-201ENSMUST00000157558 96 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 142.8 ms