Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm25937-201ENSMUST00000083912 107 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm24005-201ENSMUST00000158459 296 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm25121-201ENSMUST00000179846 79 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm27511-201ENSMUST00000183502 127 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm43739-201ENSMUST00000198294 307 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm43406-201ENSMUST00000200356 334 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm44459-201ENSMUST00000203926 160 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm24151-201ENSMUST00000082758 141 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm25651-201ENSMUST00000083782 119 ntBASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trim58Q5NCC9 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm15526-201ENSMUST00000112504 204 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm12785-201ENSMUST00000122052 172 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm14770-201ENSMUST00000122197 312 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm16355-201ENSMUST00000128606 231 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm16362-201ENSMUST00000135189 214 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm16358-201ENSMUST00000146046 210 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm25384-201ENSMUST00000157807 105 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm24726-201ENSMUST00000158232 121 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm25368-201ENSMUST00000158847 131 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.04□□□□□ -2.08
Trim58Q5NCC9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Trim58Q5NCC9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Trim58Q5NCC9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm23142-201ENSMUST00000101848 105 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm26240-201ENSMUST00000101893 105 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm25543-201ENSMUST00000122678 312 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm23331-201ENSMUST00000157423 108 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm22803-201ENSMUST00000158049 283 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm26402-201ENSMUST00000158499 113 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm16584-201ENSMUST00000159267 189 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm22263-201ENSMUST00000180060 104 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Mir7014-201ENSMUST00000183853 63 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm44654-201ENSMUST00000208052 329 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm45616-201ENSMUST00000211711 319 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm45754-201ENSMUST00000212380 279 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.03□□□□□ -2.08
Trim58Q5NCC9 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Gm23041-201ENSMUST00000083868 106 ntBASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim58Q5NCC9 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm11322-201ENSMUST00000118095 435 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm12646-201ENSMUST00000119144 238 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm12304-201ENSMUST00000120312 385 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm17100-201ENSMUST00000168963 272 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm21885-201ENSMUST00000178891 327 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm44419-201ENSMUST00000203338 229 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm23625-201ENSMUST00000082457 100 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm23378-201ENSMUST00000082942 107 ntBASIC2.02□□□□□ -2.09
Trim58Q5NCC9 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim58Q5NCC9 Gm24282-201ENSMUST00000104232 66 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm13714-201ENSMUST00000117313 221 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm28008-201ENSMUST00000184021 186 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Mir6399-201ENSMUST00000184050 84 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm28058-201ENSMUST00000186421 264 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm18433-201ENSMUST00000192747 197 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm43512-201ENSMUST00000198495 176 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm25079-201ENSMUST00000082529 203 ntBASIC2.01□□□□□ -2.09
Trim58Q5NCC9 Gm14405-201ENSMUST00000117808 2330 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm22761-201ENSMUST00000102278 96 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm24049-201ENSMUST00000102409 100 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm24338-201ENSMUST00000104205 127 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm12550-201ENSMUST00000118478 329 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm13432-201ENSMUST00000118861 241 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm27396-201ENSMUST00000157708 58 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm22665-201ENSMUST00000158720 275 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm21827-201ENSMUST00000178247 423 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm40810-201ENSMUST00000219149 253 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 AC114010.1-201ENSMUST00000222060 379 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm26126-201ENSMUST00000083188 164 ntBASIC2□□□□□ -2.09
Trim58Q5NCC9 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trim58Q5NCC9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 209.4 ms