Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm25577-201ENSMUST00000083414 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm24414-201ENSMUST00000083434 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm24861-201ENSMUST00000083459 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm24803-201ENSMUST00000083693 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm23103-201ENSMUST00000083725 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm22580-201ENSMUST00000083727 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm24260-201ENSMUST00000083741 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm23732-201ENSMUST00000083751 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm22682-201ENSMUST00000083854 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm25869-201ENSMUST00000083855 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm24693-201ENSMUST00000083885 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm26317-201ENSMUST00000083894 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm22352-201ENSMUST00000083917 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm24448-201ENSMUST00000083979 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm22798-201ENSMUST00000083992 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm26427-201ENSMUST00000093648 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm22886-201ENSMUST00000093714 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm22170-201ENSMUST00000097247 107 ntBASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.17□□□□□ -2.22
Upf3bQ3ULL6 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm13153-201ENSMUST00000120969 637 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm22654-201ENSMUST00000157874 105 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm22944-201ENSMUST00000158662 133 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm29350-201ENSMUST00000189141 541 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm37869-201ENSMUST00000193385 595 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm44491-201ENSMUST00000196794 96 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm44446-201ENSMUST00000204864 255 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm10092-201ENSMUST00000077110 180 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm26493-201ENSMUST00000083155 136 ntBASIC1.16□□□□□ -2.22
Upf3bQ3ULL6 Gm22149-201ENSMUST00000104442 136 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm13059-201ENSMUST00000119881 398 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm16038-201ENSMUST00000159317 193 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm16399-201ENSMUST00000181423 219 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Mir6381-201ENSMUST00000183426 87 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm27419-201ENSMUST00000184576 109 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm28200-201ENSMUST00000187778 315 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm29352-201ENSMUST00000188054 544 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm29378-201ENSMUST00000188723 315 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm28909-201ENSMUST00000189406 315 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm19901-201ENSMUST00000192191 495 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm35212-201ENSMUST00000196672 606 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm23370-201ENSMUST00000199545 130 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm44429-201ENSMUST00000203542 186 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm7495-201ENSMUST00000215099 426 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm23245-201ENSMUST00000083370 135 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.15□□□□□ -2.23
Upf3bQ3ULL6 Gm4732-201ENSMUST00000118778 473 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm22537-201ENSMUST00000158172 199 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm22074-201ENSMUST00000158595 113 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm22136-201ENSMUST00000158751 268 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm24668-201ENSMUST00000158935 104 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm28437-201ENSMUST00000190277 783 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm34073-201ENSMUST00000195736 212 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Snord38a-201ENSMUST00000083746 71 ntBASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
Upf3bQ3ULL6 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Gm15214-201ENSMUST00000122155 470 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Gm24915-201ENSMUST00000157288 78 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Gm25371-201ENSMUST00000158162 101 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Gm22164-201ENSMUST00000158413 106 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Gm28912-201ENSMUST00000189001 234 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Gm9251-201ENSMUST00000197202 628 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.13□□□□□ -2.23
Upf3bQ3ULL6 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Mir544-201ENSMUST00000103813 78 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm26278-201ENSMUST00000157098 132 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm24962-201ENSMUST00000157917 109 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Mir7091-201ENSMUST00000184075 79 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm29613-201ENSMUST00000185846 313 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm29005-201ENSMUST00000186773 320 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm29544-201ENSMUST00000188860 313 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm28808-201ENSMUST00000190978 313 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm37641-201ENSMUST00000193837 239 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm37693-201ENSMUST00000194562 234 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 Gm45456-201ENSMUST00000210841 243 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.12□□□□□ -2.23
Upf3bQ3ULL6 BC022960-201ENSMUST00000119987 1815 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm24338-201ENSMUST00000104205 127 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm24632-201ENSMUST00000122770 323 ntBASIC1.11□□□□□ -2.23
Upf3bQ3ULL6 Gm24777-201ENSMUST00000157644 107 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms