Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm26328-201ENSMUST00000082821 107 ntBASIC0.63□□□□□ -2.31
Cacna1bO55017 Gm22997-201ENSMUST00000082845 107 ntBASIC0.63□□□□□ -2.31
Cacna1bO55017 Gm25794-201ENSMUST00000083286 107 ntBASIC0.63□□□□□ -2.31
Cacna1bO55017 Gm25518-201ENSMUST00000083864 107 ntBASIC0.63□□□□□ -2.31
Cacna1bO55017 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Cacna1bO55017 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Cacna1bO55017 Gm22482-201ENSMUST00000122563 359 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Gm24910-201ENSMUST00000157289 272 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Gm25371-201ENSMUST00000158162 101 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Gm18396-201ENSMUST00000177095 361 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Mir7683-201ENSMUST00000183842 61 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Gm38268-201ENSMUST00000195813 193 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Mir191-201ENSMUST00000196210 74 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.62□□□□□ -2.31
Cacna1bO55017 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.62□□□□□ -2.31
Cacna1bO55017 Gm12636-201ENSMUST00000117395 624 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm11857-201ENSMUST00000119817 324 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm22143-201ENSMUST00000157401 203 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Mir3057-201ENSMUST00000175040 91 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm22584-201ENSMUST00000177935 92 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm22082-201ENSMUST00000157587 161 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm25706-201ENSMUST00000157828 247 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm22075-201ENSMUST00000158599 192 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm24388-201ENSMUST00000177872 107 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm22633-201ENSMUST00000179834 107 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm28688-201ENSMUST00000187301 268 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Cacna1bO55017 Mir703-201ENSMUST00000197105 109 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm42509-201ENSMUST00000197390 781 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.61□□□□□ -2.31
Cacna1bO55017 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm24091-201ENSMUST00000082550 83 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm23711-201ENSMUST00000083856 83 ntBASIC0.61□□□□□ -2.31
Cacna1bO55017 Gm23656-201ENSMUST00000122626 112 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Mir1904-201ENSMUST00000122702 80 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm25423-201ENSMUST00000157609 107 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm27313-201ENSMUST00000183500 142 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Mir6355-201ENSMUST00000183687 106 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm29134-201ENSMUST00000186579 126 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm28337-201ENSMUST00000190425 666 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm31123-201ENSMUST00000192094 666 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm37599-201ENSMUST00000193067 489 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm44395-201ENSMUST00000197056 153 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Mir3961-201ENSMUST00000198795 59 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm43529-201ENSMUST00000199178 412 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm18703-201ENSMUST00000215318 333 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm22620-201ENSMUST00000082700 133 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm24615-201ENSMUST00000083268 113 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Mir10a-201ENSMUST00000083585 110 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm24372-201ENSMUST00000104400 110 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm23335-201ENSMUST00000117021 90 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm22663-201ENSMUST00000158721 102 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm24084-201ENSMUST00000175173 137 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Mir3089-201ENSMUST00000175350 84 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Mir496b-201ENSMUST00000184935 113 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm44336-201ENSMUST00000203696 468 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm22508-201ENSMUST00000082772 110 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm24977-201ENSMUST00000083106 163 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm22577-201ENSMUST00000083731 109 ntBASIC0.6□□□□□ -2.31
Cacna1bO55017 Gm23422-201ENSMUST00000102000 107 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm24079-201ENSMUST00000104352 132 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm25115-201ENSMUST00000157187 140 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm24481-201ENSMUST00000157210 102 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Mir1967-201ENSMUST00000157789 82 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm23317-201ENSMUST00000157999 129 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm25012-201ENSMUST00000158396 164 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm26173-201ENSMUST00000158416 136 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm25718-201ENSMUST00000158632 118 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm20543-201ENSMUST00000174200 726 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm23090-201ENSMUST00000177331 78 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm25596-201ENSMUST00000178368 107 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm37923-201ENSMUST00000191624 161 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Cacna1bO55017 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm24268-201ENSMUST00000082990 110 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm25138-201ENSMUST00000083248 136 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Gm24861-201ENSMUST00000083459 107 ntBASIC0.59□□□□□ -2.31
Cacna1bO55017 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm25110-201ENSMUST00000116684 121 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm25775-201ENSMUST00000116716 121 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm24795-201ENSMUST00000116737 121 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm25171-201ENSMUST00000116926 121 ntBASIC0.59□□□□□ -2.32
Cacna1bO55017 Gm14013-201ENSMUST00000119006 270 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms