Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm24282-201ENSMUST00000104232 66 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm22073-201ENSMUST00000122668 189 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm24480-201ENSMUST00000157442 103 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm25051-201ENSMUST00000158602 249 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm20613-201ENSMUST00000175828 345 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm38050-201ENSMUST00000191904 238 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trim3Q9R1R2 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm25589-201ENSMUST00000082502 166 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Gm26314-201ENSMUST00000083891 107 ntBASIC1.72□□□□□ -2.13
Trim3Q9R1R2 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm14674-201ENSMUST00000117816 342 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm12926-201ENSMUST00000121158 409 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm23172-201ENSMUST00000157160 124 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm25970-201ENSMUST00000157165 86 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm25115-201ENSMUST00000157187 140 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm23048-201ENSMUST00000157237 129 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm22386-201ENSMUST00000158192 129 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm24726-201ENSMUST00000158232 121 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm7953-201ENSMUST00000168278 469 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm23660-201ENSMUST00000178362 79 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm24088-201ENSMUST00000179100 79 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Mir7093-201ENSMUST00000184195 101 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm20257-202ENSMUST00000188643 130 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm28414-201ENSMUST00000190111 294 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm37778-201ENSMUST00000191732 190 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm43431-201ENSMUST00000198577 340 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.71□□□□□ -2.14
Trim3Q9R1R2 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.71□□□□□ -2.14
Trim3Q9R1R2 Mir3096-201ENSMUST00000116685 71 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm24896-201ENSMUST00000122741 135 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm22435-201ENSMUST00000158552 128 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm24177-201ENSMUST00000158927 131 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm24656-201ENSMUST00000177548 132 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm25121-201ENSMUST00000179846 79 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm44482-201ENSMUST00000199232 103 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm45754-201ENSMUST00000212380 279 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm45704-201ENSMUST00000212582 403 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm22683-201ENSMUST00000082854 137 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm26056-201ENSMUST00000083043 104 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Mir29c-201ENSMUST00000083614 88 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trim3Q9R1R2 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.7□□□□□ -2.14
Trim3Q9R1R2 Gm26500-201ENSMUST00000101867 106 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Mir873a-201ENSMUST00000104863 77 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Gm26249-201ENSMUST00000116708 118 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Gm13439-201ENSMUST00000117541 409 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Gm22791-201ENSMUST00000157232 145 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Gm23043-201ENSMUST00000157890 109 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Gm24499-201ENSMUST00000158446 104 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Mir7678-201ENSMUST00000185076 71 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Gm24805-201ENSMUST00000082931 104 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.69□□□□□ -2.14
Trim3Q9R1R2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm22713-201ENSMUST00000116895 130 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm23983-201ENSMUST00000157142 114 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm22217-201ENSMUST00000157556 313 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm16038-201ENSMUST00000159317 193 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm45119-201ENSMUST00000207612 199 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm23731-201ENSMUST00000083749 107 ntBASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trim3Q9R1R2 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm25543-201ENSMUST00000122678 312 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm25909-201ENSMUST00000157619 121 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm24853-201ENSMUST00000158026 121 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm24005-201ENSMUST00000158459 296 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm26024-201ENSMUST00000158657 322 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm37579-201ENSMUST00000194291 142 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm44429-201ENSMUST00000203542 186 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm44149-201ENSMUST00000204256 226 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm44811-201ENSMUST00000209120 228 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trim3Q9R1R2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms