Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm24490-201ENSMUST00000083803 98 ntBASIC0.91□□□□□ -2.26
Rpa3Q9CQ71 Gm22785-201ENSMUST00000104087 132 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm25384-201ENSMUST00000157807 105 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm24198-201ENSMUST00000157812 108 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm3111-201ENSMUST00000167426 490 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm23269-201ENSMUST00000178701 107 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm27490-201ENSMUST00000184754 128 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Mir7052-201ENSMUST00000184821 65 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28110-201ENSMUST00000185782 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29057-201ENSMUST00000186468 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28737-201ENSMUST00000186808 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29147-201ENSMUST00000186846 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29118-201ENSMUST00000186908 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28433-201ENSMUST00000187085 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29227-201ENSMUST00000187139 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28759-201ENSMUST00000187621 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28831-201ENSMUST00000187739 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29034-201ENSMUST00000188099 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28752-201ENSMUST00000188340 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28569-201ENSMUST00000188748 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28120-201ENSMUST00000188812 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28369-201ENSMUST00000188993 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28537-201ENSMUST00000189026 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28861-201ENSMUST00000189681 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28717-201ENSMUST00000189950 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29180-201ENSMUST00000190003 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29575-201ENSMUST00000190597 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29631-201ENSMUST00000191065 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm28160-201ENSMUST00000191229 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm29469-201ENSMUST00000191448 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm37658-201ENSMUST00000192672 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm37709-201ENSMUST00000195074 600 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm34073-201ENSMUST00000195736 212 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm37129-201ENSMUST00000195791 315 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm44491-201ENSMUST00000196794 96 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm44395-201ENSMUST00000197056 153 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm45878-201ENSMUST00000211839 241 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm2628-201ENSMUST00000218019 426 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm24624-201ENSMUST00000082617 164 ntBASIC0.9□□□□□ -2.27
Rpa3Q9CQ71 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm26249-201ENSMUST00000116708 118 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm12449-201ENSMUST00000117572 234 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm13804-201ENSMUST00000119552 172 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm24084-201ENSMUST00000175173 137 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Mir3968-201ENSMUST00000175355 100 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm23144-201ENSMUST00000180226 107 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Mir8119-201ENSMUST00000183371 129 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Mir7663-201ENSMUST00000183950 61 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm29817-201ENSMUST00000210098 172 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 AC116589.7-201ENSMUST00000221061 239 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 AC164117.1-201ENSMUST00000221726 239 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Snord1a-201ENSMUST00000083160 74 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.89□□□□□ -2.27
Rpa3Q9CQ71 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm23124-201ENSMUST00000157650 107 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm23277-201ENSMUST00000157914 136 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm23893-201ENSMUST00000158106 134 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm8125-201ENSMUST00000216602 738 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm25475-201ENSMUST00000082825 180 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm23377-201ENSMUST00000082943 126 ntBASIC0.88□□□□□ -2.27
Rpa3Q9CQ71 Gm23766-201ENSMUST00000103894 80 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm26074-201ENSMUST00000104063 129 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm27421-201ENSMUST00000184729 167 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm38333-201ENSMUST00000193608 604 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm44990-201ENSMUST00000203922 217 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm25128-201ENSMUST00000083339 76 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Rpa3Q9CQ71 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm24431-201ENSMUST00000104073 66 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm25506-201ENSMUST00000104339 70 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm24588-201ENSMUST00000116696 83 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm4732-201ENSMUST00000118778 473 ntBASIC0.86□□□□□ -2.27
Rpa3Q9CQ71 Gm12806-201ENSMUST00000119384 268 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 160 ms