Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm22491-201ENSMUST00000157190 102 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm25488-201ENSMUST00000158728 118 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm17100-201ENSMUST00000168963 272 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm22800-201ENSMUST00000175627 94 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm27959-201ENSMUST00000185172 111 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm28848-201ENSMUST00000189984 168 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm44429-201ENSMUST00000203542 186 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm45673-201ENSMUST00000210293 358 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.19□□□□□ -2.06
Trim60Q8VI40 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.19□□□□□ -2.06
Trim60Q8VI40 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trim60Q8VI40 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.19□□□□□ -2.06
Trim60Q8VI40 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm26500-201ENSMUST00000101867 106 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm24907-201ENSMUST00000116932 128 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm22678-201ENSMUST00000116974 101 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm14307-201ENSMUST00000118930 291 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm15365-201ENSMUST00000122392 300 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm14297-201ENSMUST00000129110 291 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm16362-201ENSMUST00000135189 214 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm16358-201ENSMUST00000146046 210 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm22843-201ENSMUST00000157710 134 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm25460-201ENSMUST00000157954 127 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm25711-201ENSMUST00000158633 128 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm16584-201ENSMUST00000159267 189 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm16038-201ENSMUST00000159317 193 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm25284-201ENSMUST00000180345 141 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm37404-201ENSMUST00000195726 359 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm42672-201ENSMUST00000197821 352 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.18□□□□□ -2.06
Trim60Q8VI40 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
Trim60Q8VI40 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trim60Q8VI40 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm23551-201ENSMUST00000116852 121 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm13518-201ENSMUST00000120018 233 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm15281-201ENSMUST00000125181 351 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm25888-201ENSMUST00000157778 302 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm24237-201ENSMUST00000157790 132 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm23779-201ENSMUST00000157938 64 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm22434-201ENSMUST00000158549 122 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Mir7016-201ENSMUST00000184308 72 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm37338-201ENSMUST00000191986 127 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm44320-201ENSMUST00000199276 86 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.17□□□□□ -2.06
Trim60Q8VI40 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.17□□□□□ -2.06
Trim60Q8VI40 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.17□□□□□ -2.06
Trim60Q8VI40 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trim60Q8VI40 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim60Q8VI40 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim60Q8VI40 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm23472-201ENSMUST00000101806 191 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm24497-201ENSMUST00000177868 191 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm24799-201ENSMUST00000178431 79 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm25933-201ENSMUST00000178943 108 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm25939-201ENSMUST00000179876 191 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm27399-201ENSMUST00000184250 78 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm42807-201ENSMUST00000200141 329 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm19572-201ENSMUST00000214326 338 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm23444-201ENSMUST00000082922 191 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Mir300-201ENSMUST00000083485 79 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm23731-201ENSMUST00000083749 107 ntBASIC2.16□□□□□ -2.06
Trim60Q8VI40 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim60Q8VI40 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
Trim60Q8VI40 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.15□□□□□ -2.06
Trim60Q8VI40 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm11859-201ENSMUST00000118099 455 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm22945-201ENSMUST00000158557 157 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm24348-201ENSMUST00000158710 130 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm22263-201ENSMUST00000180060 104 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm28418-201ENSMUST00000186179 423 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm29005-201ENSMUST00000186773 320 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm28288-201ENSMUST00000191019 214 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm3724-201ENSMUST00000197957 349 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm44477-201ENSMUST00000199661 110 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm44063-201ENSMUST00000203307 376 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm43865-201ENSMUST00000204721 127 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm44960-201ENSMUST00000207403 141 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.15□□□□□ -2.07
Trim60Q8VI40 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm25788-201ENSMUST00000082721 131 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm25402-201ENSMUST00000082966 131 ntBASIC2.15□□□□□ -2.07
Trim60Q8VI40 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim60Q8VI40 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.14□□□□□ -2.07
Trim60Q8VI40 Mir872-201ENSMUST00000104728 81 ntBASIC2.14□□□□□ -2.07
Trim60Q8VI40 Gm22713-201ENSMUST00000116895 130 ntBASIC2.14□□□□□ -2.07
Trim60Q8VI40 Gm15536-201ENSMUST00000121411 114 ntBASIC2.14□□□□□ -2.07
Trim60Q8VI40 Gm12785-201ENSMUST00000122052 172 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 143.3 ms