Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm11598-201ENSMUST00000119257 357 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm12304-201ENSMUST00000120312 385 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm22537-201ENSMUST00000158172 199 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm22433-201ENSMUST00000158550 142 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm29657-201ENSMUST00000189807 342 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm38311-201ENSMUST00000192945 165 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm37746-201ENSMUST00000193249 198 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.1□□□□□ -1.91
Brf1Q8CFK2 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm12954-201ENSMUST00000118610 611 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm15497-201ENSMUST00000119137 551 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm15162-201ENSMUST00000119325 283 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm22215-201ENSMUST00000157558 96 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm25664-201ENSMUST00000157697 107 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm24691-201ENSMUST00000157762 140 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm25235-201ENSMUST00000179933 107 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm27271-201ENSMUST00000183509 170 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Mir6540-201ENSMUST00000184886 108 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm2077-201ENSMUST00000195017 319 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm45452-201ENSMUST00000210905 177 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.09□□□□□ -1.91
Brf1Q8CFK2 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm22978-201ENSMUST00000082607 160 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm25482-201ENSMUST00000083225 107 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.09□□□□□ -1.91
Brf1Q8CFK2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Brf1Q8CFK2 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.09□□□□□ -1.92
Brf1Q8CFK2 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.92
Brf1Q8CFK2 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm12417-201ENSMUST00000119153 403 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm11414-201ENSMUST00000121795 263 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm25153-201ENSMUST00000157118 156 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm7958-201ENSMUST00000178255 468 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm7950-201ENSMUST00000179633 468 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Mir6916-201ENSMUST00000184514 63 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Mir6481-201ENSMUST00000184617 110 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm28453-203ENSMUST00000187041 189 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm29167-201ENSMUST00000190024 377 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Gm23847-201ENSMUST00000083829 110 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Brf1Q8CFK2 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.08□□□□□ -1.92
Brf1Q8CFK2 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm22784-201ENSMUST00000104088 132 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm24392-201ENSMUST00000158136 103 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm24667-201ENSMUST00000158938 103 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm22853-201ENSMUST00000174974 131 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm22450-201ENSMUST00000179641 107 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm25473-201ENSMUST00000180191 107 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm27421-201ENSMUST00000184729 167 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm27540-201ENSMUST00000184950 187 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm19123-201ENSMUST00000190716 651 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm4945-201ENSMUST00000075152 453 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm24856-201ENSMUST00000082809 107 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm26071-201ENSMUST00000083261 107 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm24521-201ENSMUST00000083958 107 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Brf1Q8CFK2 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm25407-201ENSMUST00000104102 134 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm25270-201ENSMUST00000122606 138 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm16533-201ENSMUST00000140035 228 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm23600-201ENSMUST00000157260 71 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm23219-201ENSMUST00000158123 87 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm24388-201ENSMUST00000177872 107 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm25024-201ENSMUST00000179667 104 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Brf1Q8CFK2 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.06□□□□□ -1.92
Brf1Q8CFK2 Gm6030-201ENSMUST00000078768 402 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms