Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm23043-201ENSMUST00000157890 109 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm22386-201ENSMUST00000158192 129 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm23933-201ENSMUST00000178405 79 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Mir3068-202ENSMUST00000197755 79 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm23202-201ENSMUST00000104376 129 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm15211-201ENSMUST00000118932 528 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm12924-201ENSMUST00000121747 318 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm26181-201ENSMUST00000157687 106 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm23779-201ENSMUST00000157938 64 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm24846-201ENSMUST00000158033 108 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm25020-201ENSMUST00000178071 107 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Mir6346-201ENSMUST00000183982 81 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm27248-201ENSMUST00000184004 166 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm27991-201ENSMUST00000184804 137 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm42739-201ENSMUST00000200687 226 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm44063-201ENSMUST00000203307 376 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm8940-201ENSMUST00000212585 219 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trim58Q5NCC9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Gm24165-201ENSMUST00000082718 128 ntBASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.09□□□□□ -2.07
Trim58Q5NCC9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Trim58Q5NCC9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Mir701-201ENSMUST00000102208 109 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm23950-201ENSMUST00000104026 129 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm22479-201ENSMUST00000122566 81 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm25054-201ENSMUST00000157370 97 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm24174-201ENSMUST00000158933 111 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm25671-201ENSMUST00000178612 105 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm23307-201ENSMUST00000179167 105 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm25286-201ENSMUST00000179790 105 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm28016-201ENSMUST00000184594 196 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Mir7050-201ENSMUST00000184636 60 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm28383-201ENSMUST00000187563 139 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm29262-201ENSMUST00000190084 196 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm7065-201ENSMUST00000222150 474 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm22685-201ENSMUST00000082848 106 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Gm23731-201ENSMUST00000083749 107 ntBASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trim58Q5NCC9 Mir669d-201ENSMUST00000104644 121 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Mir669i-201ENSMUST00000117007 127 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm14748-201ENSMUST00000119819 411 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm14761-201ENSMUST00000121363 262 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm25781-201ENSMUST00000122527 84 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm25269-201ENSMUST00000122601 104 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm23120-201ENSMUST00000157654 287 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm22434-201ENSMUST00000158549 122 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm20462-201ENSMUST00000172623 408 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm24487-201ENSMUST00000178017 63 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm43680-201ENSMUST00000199466 340 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm45150-201ENSMUST00000206051 467 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm44960-201ENSMUST00000207403 141 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm23412-201ENSMUST00000083017 107 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Mir93-201ENSMUST00000083593 88 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm23040-201ENSMUST00000083869 163 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm26314-201ENSMUST00000083891 107 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Mir496a-201ENSMUST00000093627 79 ntBASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.07□□□□□ -2.08
Trim58Q5NCC9 Gm26249-201ENSMUST00000116708 118 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm13439-201ENSMUST00000117541 409 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm15067-201ENSMUST00000119534 156 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm23214-201ENSMUST00000122716 157 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trim58Q5NCC9 U6.1-201ENSMUST00000157443 101 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm25454-201ENSMUST00000157947 315 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm22483-201ENSMUST00000157986 274 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm23262-201ENSMUST00000158323 168 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm26400-201ENSMUST00000175012 85 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm25284-201ENSMUST00000180345 141 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Mir6351-201ENSMUST00000183826 99 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm27905-201ENSMUST00000184005 207 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Mir6352-201ENSMUST00000184495 116 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm28825-201ENSMUST00000186233 238 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm28408-201ENSMUST00000191557 463 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm37313-201ENSMUST00000191673 290 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm44909-201ENSMUST00000208756 165 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trim58Q5NCC9 Gm26066-201ENSMUST00000083385 109 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 181 ms