Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm16354-201ENSMUST00000155376 150 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm24304-201ENSMUST00000177635 107 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm23862-201ENSMUST00000180342 94 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Mir6346-201ENSMUST00000183982 81 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm27640-201ENSMUST00000184580 147 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm28418-201ENSMUST00000186179 423 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm44472-201ENSMUST00000204922 943 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm45101-201ENSMUST00000208327 232 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm13368-201ENSMUST00000122443 430 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm23660-201ENSMUST00000178362 79 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm24088-201ENSMUST00000179100 79 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm27905-201ENSMUST00000184005 207 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm43505-201ENSMUST00000200579 139 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm44870-201ENSMUST00000207291 357 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm5023-201ENSMUST00000217442 587 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm23650-201ENSMUST00000083355 70 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Mir211-201ENSMUST00000083651 106 ntBASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col4a4Q9QZR9 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm12872-201ENSMUST00000121835 320 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm26275-201ENSMUST00000157101 268 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm23559-201ENSMUST00000157824 103 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm24439-201ENSMUST00000157894 117 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm23411-201ENSMUST00000157988 62 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm22085-201ENSMUST00000158344 110 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm23016-201ENSMUST00000158431 62 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm26402-201ENSMUST00000158499 113 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm3027-201ENSMUST00000167579 451 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm25671-201ENSMUST00000178612 105 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm23307-201ENSMUST00000179167 105 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm25286-201ENSMUST00000179790 105 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm27332-201ENSMUST00000184893 112 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm29490-201ENSMUST00000190923 342 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm37128-201ENSMUST00000192599 232 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm45402-201ENSMUST00000211796 223 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Gm19326-201ENSMUST00000219818 326 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Mir221-201ENSMUST00000083488 95 ntBASIC1.41□□□□□ -2.18
Col4a4Q9QZR9 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col4a4Q9QZR9 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Col4a4Q9QZR9 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.4□□□□□ -2.18
Col4a4Q9QZR9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Mir701-201ENSMUST00000102208 109 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm22656-201ENSMUST00000104199 171 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm15175-201ENSMUST00000117629 132 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm9059-201ENSMUST00000118319 183 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm13876-201ENSMUST00000118451 261 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm14980-201ENSMUST00000121247 736 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm14638-201ENSMUST00000121338 216 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm24192-201ENSMUST00000157978 145 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm23933-201ENSMUST00000178405 79 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm24168-201ENSMUST00000178825 107 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm28008-201ENSMUST00000184021 186 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm21673-201ENSMUST00000186640 436 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm21135-201ENSMUST00000189023 436 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm23412-201ENSMUST00000083017 107 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm25793-201ENSMUST00000083287 107 ntBASIC1.4□□□□□ -2.19
Col4a4Q9QZR9 Gm24275-201ENSMUST00000116780 146 ntBASIC1.39□□□□□ -2.19
Col4a4Q9QZR9 Snord98-201ENSMUST00000116819 65 ntBASIC1.39□□□□□ -2.19
Col4a4Q9QZR9 Gm11859-201ENSMUST00000118099 455 ntBASIC1.39□□□□□ -2.19
Col4a4Q9QZR9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Col4a4Q9QZR9 Gm14765-201ENSMUST00000121954 326 ntBASIC1.39□□□□□ -2.19
Col4a4Q9QZR9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.39□□□□□ -2.19
Col4a4Q9QZR9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.39□□□□□ -2.19
Col4a4Q9QZR9 Gm22038-201ENSMUST00000157277 242 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 147.6 ms