Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm18696-201ENSMUST00000220103 274 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Mir29c-201ENSMUST00000083614 88 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm15010-201ENSMUST00000117153 407 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm13672-201ENSMUST00000117554 459 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm14392-201ENSMUST00000120332 401 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm14413-201ENSMUST00000122158 408 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm23048-201ENSMUST00000157237 129 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm24262-201ENSMUST00000157431 144 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm23589-201ENSMUST00000157660 105 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm22316-201ENSMUST00000158012 216 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm24577-201ENSMUST00000158580 63 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm24348-201ENSMUST00000158710 130 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm9227-201ENSMUST00000194733 566 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm44482-201ENSMUST00000199232 103 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm45815-201ENSMUST00000220241 146 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm46312-201ENSMUST00000220961 420 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm24623-201ENSMUST00000082616 194 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.5□□□□□ -2.17
Snf8Q9CZ28 Gm25115-201ENSMUST00000157187 140 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Gm25059-201ENSMUST00000157367 117 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Snord13-201ENSMUST00000157627 104 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Gm24333-201ENSMUST00000175101 84 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Gm25994-201ENSMUST00000175392 101 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Gm22862-201ENSMUST00000178593 121 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Gm28506-201ENSMUST00000189937 150 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Gm5034-201ENSMUST00000199115 634 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Snord43-201ENSMUST00000199549 108 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Snf8Q9CZ28 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Snf8Q9CZ28 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm22713-201ENSMUST00000116895 130 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm11359-201ENSMUST00000120039 567 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm25054-201ENSMUST00000157370 97 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm23558-201ENSMUST00000157823 80 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm22654-201ENSMUST00000157874 105 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm24551-201ENSMUST00000158645 92 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Snf8Q9CZ28 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm29657-201ENSMUST00000189807 342 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm43914-201ENSMUST00000203592 594 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm16976-205ENSMUST00000227324 226 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Mir320-201ENSMUST00000083594 82 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.48□□□□□ -2.17
Snf8Q9CZ28 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm12351-201ENSMUST00000118727 292 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm23983-201ENSMUST00000157142 114 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm24480-201ENSMUST00000157442 103 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm22338-201ENSMUST00000157715 129 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm24409-201ENSMUST00000157881 152 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm23016-201ENSMUST00000158431 62 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm16162-201ENSMUST00000162296 297 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm26430-201ENSMUST00000178054 107 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm26652-202ENSMUST00000181672 475 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm42960-201ENSMUST00000202160 241 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm25589-201ENSMUST00000082502 166 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Mir151-201ENSMUST00000083678 68 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm26175-201ENSMUST00000083794 131 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm25207-201ENSMUST00000093745 107 ntBASIC1.47□□□□□ -2.17
Snf8Q9CZ28 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Snf8Q9CZ28 Gm24896-201ENSMUST00000122741 135 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm23172-201ENSMUST00000157160 124 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm22559-201ENSMUST00000157329 134 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm22217-201ENSMUST00000157556 313 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm22082-201ENSMUST00000157587 161 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm20613-201ENSMUST00000175828 345 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm22308-201ENSMUST00000177609 107 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm25314-201ENSMUST00000178810 79 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Mir7050-201ENSMUST00000184636 60 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm44726-201ENSMUST00000203427 217 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm45315-201ENSMUST00000209283 333 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm22997-201ENSMUST00000082845 107 ntBASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Snf8Q9CZ28 Gm11386-201ENSMUST00000117761 347 ntBASIC1.45□□□□□ -2.18
Snf8Q9CZ28 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.45□□□□□ -2.18
Snf8Q9CZ28 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 1484.4 ms