Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.36□□□□□ -1.87
RpainQ9CWY9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.36□□□□□ -1.87
RpainQ9CWY9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.36□□□□□ -1.87
RpainQ9CWY9 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.36□□□□□ -1.87
RpainQ9CWY9 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
RpainQ9CWY9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Gm23175-201ENSMUST00000104371 132 ntBASIC3.35□□□□□ -1.87
RpainQ9CWY9 Gm26027-201ENSMUST00000122725 268 ntBASIC3.35□□□□□ -1.87
RpainQ9CWY9 Gm22516-201ENSMUST00000158266 124 ntBASIC3.35□□□□□ -1.87
RpainQ9CWY9 Gm22521-201ENSMUST00000158272 134 ntBASIC3.35□□□□□ -1.87
RpainQ9CWY9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.35□□□□□ -1.87
RpainQ9CWY9 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.35□□□□□ -1.87
RpainQ9CWY9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RpainQ9CWY9 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.35□□□□□ -1.87
RpainQ9CWY9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RpainQ9CWY9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RpainQ9CWY9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RpainQ9CWY9 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RpainQ9CWY9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm23651-201ENSMUST00000116755 120 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm15497-201ENSMUST00000119137 551 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm22883-201ENSMUST00000157376 106 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm23331-201ENSMUST00000157423 108 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm23197-201ENSMUST00000158809 112 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm6003-201ENSMUST00000187903 463 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.34□□□□□ -1.87
RpainQ9CWY9 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm23722-201ENSMUST00000083002 130 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Gm10351-201ENSMUST00000087694 125 ntBASIC3.34□□□□□ -1.87
RpainQ9CWY9 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RpainQ9CWY9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
RpainQ9CWY9 Gm24118-201ENSMUST00000103972 126 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm9009-201ENSMUST00000117321 326 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm14593-201ENSMUST00000119948 294 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm14069-201ENSMUST00000120815 229 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm26020-201ENSMUST00000122729 183 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm23391-201ENSMUST00000157579 104 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm23044-201ENSMUST00000157891 100 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm16404-201ENSMUST00000177739 468 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm6660-201ENSMUST00000179149 468 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm14598-201ENSMUST00000180109 468 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm14625-201ENSMUST00000180231 468 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm27527-201ENSMUST00000183903 99 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm27249-201ENSMUST00000185049 328 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm42855-201ENSMUST00000197388 253 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm23136-201ENSMUST00000083425 99 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm23850-201ENSMUST00000083830 169 ntBASIC3.33□□□□□ -1.88
RpainQ9CWY9 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RpainQ9CWY9 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm22779-201ENSMUST00000104085 107 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm26293-201ENSMUST00000104170 84 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Mir878-201ENSMUST00000104680 78 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm14518-201ENSMUST00000117351 542 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm14629-201ENSMUST00000122428 144 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Mir7062-201ENSMUST00000185038 66 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm42774-201ENSMUST00000198854 283 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.32□□□□□ -1.88
RpainQ9CWY9 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.32□□□□□ -1.88
RpainQ9CWY9 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 Gm12213-201ENSMUST00000119924 353 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.31□□□□□ -1.88
RpainQ9CWY9 Gm28000-201ENSMUST00000184380 85 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 Gm27520-201ENSMUST00000184872 81 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.31□□□□□ -1.88
RpainQ9CWY9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RpainQ9CWY9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.31□□□□□ -1.88
RpainQ9CWY9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.31□□□□□ -1.88
RpainQ9CWY9 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 Snord14d-201ENSMUST00000083424 86 ntBASIC3.31□□□□□ -1.88
RpainQ9CWY9 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RpainQ9CWY9 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RpainQ9CWY9 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
RpainQ9CWY9 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RpainQ9CWY9 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.3□□□□□ -1.88
RpainQ9CWY9 Gm15714-201ENSMUST00000117168 250 ntBASIC3.3□□□□□ -1.88
RpainQ9CWY9 Gm26277-201ENSMUST00000157097 152 ntBASIC3.3□□□□□ -1.88
RpainQ9CWY9 Gm26100-201ENSMUST00000157245 127 ntBASIC3.3□□□□□ -1.88
RpainQ9CWY9 Gm25424-201ENSMUST00000157612 58 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms