Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mir465d-201ENSMUST00000196314 58 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm23462-201ENSMUST00000083264 104 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Brf1Q8CFK2 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Gm24116-201ENSMUST00000103975 107 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Mir881-201ENSMUST00000104844 78 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Mir466k-201ENSMUST00000116774 122 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Gm26411-201ENSMUST00000157668 107 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Gm22192-201ENSMUST00000175128 85 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Gm45859-201ENSMUST00000212794 214 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Gm18346-201ENSMUST00000216782 325 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Brf1Q8CFK2 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.15□□□□□ -1.91
Brf1Q8CFK2 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Gm25632-201ENSMUST00000083112 85 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Brf1Q8CFK2 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm26247-201ENSMUST00000116702 91 ntBASIC3.14□□□□□ -1.91
Brf1Q8CFK2 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm22321-201ENSMUST00000157152 104 ntBASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm22382-201ENSMUST00000158185 130 ntBASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm43901-201ENSMUST00000203247 453 ntBASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
Brf1Q8CFK2 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.14□□□□□ -1.91
Brf1Q8CFK2 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm24640-201ENSMUST00000116949 126 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm22626-201ENSMUST00000116990 126 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Mir1b-201ENSMUST00000117012 122 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm24892-201ENSMUST00000122747 104 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm23640-201ENSMUST00000157860 104 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm24761-201ENSMUST00000179589 127 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm24488-201ENSMUST00000179934 127 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm25701-201ENSMUST00000179988 127 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm26431-201ENSMUST00000180199 127 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm27582-201ENSMUST00000184084 126 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.13□□□□□ -1.91
Brf1Q8CFK2 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm23247-201ENSMUST00000083373 107 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Gm24817-201ENSMUST00000093672 105 ntBASIC3.13□□□□□ -1.91
Brf1Q8CFK2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Brf1Q8CFK2 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.12□□□□□ -1.91
Brf1Q8CFK2 Gm5396-201ENSMUST00000121222 532 ntBASIC3.12□□□□□ -1.91
Brf1Q8CFK2 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.12□□□□□ -1.91
Brf1Q8CFK2 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.12□□□□□ -1.91
Brf1Q8CFK2 Gm20718-201ENSMUST00000176058 259 ntBASIC3.12□□□□□ -1.91
Brf1Q8CFK2 Gm27220-201ENSMUST00000183453 262 ntBASIC3.12□□□□□ -1.91
Brf1Q8CFK2 Mir6993-201ENSMUST00000184912 65 ntBASIC3.12□□□□□ -1.91
Brf1Q8CFK2 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm23013-201ENSMUST00000104146 106 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm15282-201ENSMUST00000117707 300 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm12213-201ENSMUST00000119924 353 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm23982-201ENSMUST00000157141 106 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm23901-201ENSMUST00000157570 107 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm23892-201ENSMUST00000158105 130 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm27379-201ENSMUST00000183730 123 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm27698-201ENSMUST00000184060 249 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm43264-201ENSMUST00000202284 325 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Brf1Q8CFK2 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.11□□□□□ -1.91
Brf1Q8CFK2 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm24122-201ENSMUST00000104107 132 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm24670-201ENSMUST00000104154 132 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm23705-201ENSMUST00000104370 130 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm15846-201ENSMUST00000116022 320 ntBASIC3.1□□□□□ -1.91
Brf1Q8CFK2 Gm23841-201ENSMUST00000116951 114 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms