Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm24998-201ENSMUST00000157908 89 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm23895-201ENSMUST00000158108 160 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm22890-201ENSMUST00000158642 144 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm26022-201ENSMUST00000158663 108 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm37698-201ENSMUST00000192605 463 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm11351-202ENSMUST00000225724 478 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ubp1Q811S7 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm25888-201ENSMUST00000157778 302 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm26482-201ENSMUST00000158015 62 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm25488-201ENSMUST00000158728 118 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.57□□□□□ -1.84
Ubp1Q811S7 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ubp1Q811S7 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ubp1Q811S7 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.57□□□□□ -1.84
Ubp1Q811S7 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Mir374b-201ENSMUST00000102314 95 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm24263-201ENSMUST00000104059 107 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm25833-201ENSMUST00000104137 133 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm6071-201ENSMUST00000119561 440 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm11704-201ENSMUST00000120031 214 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm23957-201ENSMUST00000157209 90 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm23381-201ENSMUST00000157676 94 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Mir1966-201ENSMUST00000158807 108 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm22367-201ENSMUST00000178930 132 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm5224-201ENSMUST00000183060 350 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm27760-201ENSMUST00000185048 114 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm6003-201ENSMUST00000187903 463 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm37693-201ENSMUST00000194562 234 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm44922-201ENSMUST00000206690 90 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm25592-201ENSMUST00000082635 131 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Ubp1Q811S7 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.56□□□□□ -1.84
Ubp1Q811S7 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubp1Q811S7 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ubp1Q811S7 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ubp1Q811S7 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Ubp1Q811S7 Gm11285-201ENSMUST00000118443 322 ntBASIC3.55□□□□□ -1.84
Ubp1Q811S7 Gm22310-201ENSMUST00000157509 116 ntBASIC3.55□□□□□ -1.84
Ubp1Q811S7 Gm27773-201ENSMUST00000184087 78 ntBASIC3.55□□□□□ -1.84
Ubp1Q811S7 Mir6715-201ENSMUST00000184990 57 ntBASIC3.55□□□□□ -1.84
Ubp1Q811S7 Gm44666-201ENSMUST00000208544 391 ntBASIC3.55□□□□□ -1.84
Ubp1Q811S7 Gm34779-201ENSMUST00000210036 263 ntBASIC3.55□□□□□ -1.84
Ubp1Q811S7 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.55□□□□□ -1.84
Ubp1Q811S7 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Ubp1Q811S7 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Ubp1Q811S7 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Ubp1Q811S7 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ubp1Q811S7 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm22221-201ENSMUST00000157362 103 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm23123-201ENSMUST00000157648 144 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm24727-201ENSMUST00000158231 144 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm24676-201ENSMUST00000158758 75 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm25071-201ENSMUST00000175232 70 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm26435-201ENSMUST00000179026 107 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Mir6907-201ENSMUST00000183764 71 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Mir6385-201ENSMUST00000184295 105 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ubp1Q811S7 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm44343-201ENSMUST00000196702 90 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm44399-201ENSMUST00000205043 226 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.54□□□□□ -1.84
Ubp1Q811S7 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.54□□□□□ -1.84
Ubp1Q811S7 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ubp1Q811S7 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.53□□□□□ -1.84
Ubp1Q811S7 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ubp1Q811S7 Gm12213-201ENSMUST00000119924 353 ntBASIC3.53□□□□□ -1.84
Ubp1Q811S7 Gm13862-201ENSMUST00000121220 197 ntBASIC3.53□□□□□ -1.84
Ubp1Q811S7 Gm25105-201ENSMUST00000122477 130 ntBASIC3.53□□□□□ -1.84
Ubp1Q811S7 Gm23230-201ENSMUST00000157298 133 ntBASIC3.53□□□□□ -1.84
Ubp1Q811S7 Gm23182-201ENSMUST00000158688 135 ntBASIC3.53□□□□□ -1.84
Ubp1Q811S7 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms