Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm20885-201ENSMUST00000190192 654 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm19777-201ENSMUST00000191940 358 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm45119-201ENSMUST00000207612 199 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trim58Q5NCC9 Gm24172-201ENSMUST00000104127 117 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm14402-201ENSMUST00000122217 508 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Mir669n-201ENSMUST00000158636 54 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm26024-201ENSMUST00000158657 322 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm27959-201ENSMUST00000185172 111 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm28717-201ENSMUST00000189950 315 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm43193-201ENSMUST00000197732 441 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm45315-201ENSMUST00000209283 333 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm45375-201ENSMUST00000210338 280 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trim58Q5NCC9 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim58Q5NCC9 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Gm27926-201ENSMUST00000157180 66 ntBASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Gm17919-201ENSMUST00000173344 312 ntBASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Gm37404-201ENSMUST00000195726 359 ntBASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Gm43286-201ENSMUST00000197420 424 ntBASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim58Q5NCC9 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm6954-201ENSMUST00000117416 225 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm14709-201ENSMUST00000121225 304 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm24601-201ENSMUST00000157970 143 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm24858-201ENSMUST00000158058 323 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm22242-201ENSMUST00000175224 118 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm21978-201ENSMUST00000179696 377 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm28579-201ENSMUST00000186143 369 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm28418-201ENSMUST00000186179 423 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm20257-202ENSMUST00000188643 130 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Gm7214-201ENSMUST00000222428 272 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.13□□□□□ -2.07
Trim58Q5NCC9 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.13□□□□□ -2.07
Trim58Q5NCC9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trim58Q5NCC9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Gm26500-201ENSMUST00000101867 106 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Mir758-201ENSMUST00000103260 81 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Gm22270-201ENSMUST00000104034 132 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Gm27640-201ENSMUST00000184580 147 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Gm29397-201ENSMUST00000185205 333 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.12□□□□□ -2.07
Trim58Q5NCC9 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Snord42a-201ENSMUST00000082606 65 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Gm23721-201ENSMUST00000083005 107 ntBASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Trim58Q5NCC9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm13378-201ENSMUST00000117483 336 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm14980-201ENSMUST00000121247 736 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm26105-201ENSMUST00000157253 190 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm23829-201ENSMUST00000157392 270 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm22382-201ENSMUST00000158185 130 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Mir3103-201ENSMUST00000175474 67 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm27761-201ENSMUST00000184091 131 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm42570-201ENSMUST00000195937 292 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.11□□□□□ -2.07
Trim58Q5NCC9 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm24582-201ENSMUST00000103967 103 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm15497-201ENSMUST00000119137 551 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm24892-201ENSMUST00000122747 104 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm23586-201ENSMUST00000157657 123 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm23557-201ENSMUST00000157820 138 ntBASIC2.1□□□□□ -2.07
Trim58Q5NCC9 Gm22654-201ENSMUST00000157874 105 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 213.1 ms