Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm18417-201ENSMUST00000176564 648 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm27326-201ENSMUST00000183504 95 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm19441-201ENSMUST00000221545 330 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Mir463-201ENSMUST00000093570 75 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm25068-201ENSMUST00000103895 110 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm14355-201ENSMUST00000117352 264 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm14937-201ENSMUST00000119709 208 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm14362-201ENSMUST00000121679 273 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm14364-201ENSMUST00000129209 267 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm15254-201ENSMUST00000149567 273 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm25914-201ENSMUST00000157618 153 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm23725-201ENSMUST00000177876 107 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Mir7665-201ENSMUST00000184907 63 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm28995-201ENSMUST00000186625 261 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Upf3bQ3ULL6 Mir582-201ENSMUST00000103758 81 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm13672-201ENSMUST00000117554 459 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm23656-201ENSMUST00000122626 112 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm23120-201ENSMUST00000157654 287 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm21815-201ENSMUST00000178213 664 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm20874-201ENSMUST00000178356 663 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm9830-201ENSMUST00000178509 357 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm23714-201ENSMUST00000179259 105 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Mir496b-201ENSMUST00000184935 113 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm29037-201ENSMUST00000189092 313 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Mir6962-201ENSMUST00000199512 63 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm35736-201ENSMUST00000203681 313 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm45366-201ENSMUST00000209828 384 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Snord118-201ENSMUST00000082965 135 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm24536-201ENSMUST00000083144 107 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Snora34-201ENSMUST00000083402 138 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Gm24252-201ENSMUST00000083700 132 ntBASIC1.21□□□□□ -2.22
Upf3bQ3ULL6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm23766-201ENSMUST00000103894 80 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm23015-201ENSMUST00000104145 128 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm22193-201ENSMUST00000116868 76 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm16242-201ENSMUST00000117741 334 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Mir1904-201ENSMUST00000122702 80 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm22027-201ENSMUST00000122737 127 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm22221-201ENSMUST00000157362 103 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm22818-201ENSMUST00000157446 104 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Mir8116-201ENSMUST00000184134 97 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm28740-201ENSMUST00000186142 215 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Mir691-201ENSMUST00000199719 78 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Gm46993-201ENSMUST00000220708 259 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Snord14a-201ENSMUST00000082807 87 ntBASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
Upf3bQ3ULL6 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm13457-201ENSMUST00000117885 267 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm25384-201ENSMUST00000157807 105 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm26089-201ENSMUST00000157898 107 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm22328-201ENSMUST00000158074 112 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm25069-201ENSMUST00000175238 86 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm24390-201ENSMUST00000179578 62 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm24615-201ENSMUST00000083268 113 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm23093-201ENSMUST00000083450 102 ntBASIC1.19□□□□□ -2.22
Upf3bQ3ULL6 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Mir374b-201ENSMUST00000102314 95 ntBASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Gm24172-201ENSMUST00000104127 117 ntBASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Gm24282-201ENSMUST00000104232 66 ntBASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Gm25876-201ENSMUST00000104329 119 ntBASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Mir1967-201ENSMUST00000157789 82 ntBASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.18□□□□□ -2.22
Upf3bQ3ULL6 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms