Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm12053-201ENSMUST00000119022 252 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm26102-201ENSMUST00000157251 284 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm25121-201ENSMUST00000179846 79 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm44726-201ENSMUST00000203427 217 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm25801-201ENSMUST00000082638 106 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm25853-201ENSMUST00000082793 132 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22572-201ENSMUST00000082985 105 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Mir107-201ENSMUST00000083660 87 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22577-201ENSMUST00000083731 109 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm23042-201ENSMUST00000083866 101 ntBASIC1.24□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22003-201ENSMUST00000101885 107 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Mir343-201ENSMUST00000102360 75 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22771-201ENSMUST00000104449 91 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm25335-201ENSMUST00000158043 103 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22129-201ENSMUST00000179034 107 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm23410-201ENSMUST00000179967 107 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22756-201ENSMUST00000180118 107 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm29848-201ENSMUST00000203107 295 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22306-201ENSMUST00000082692 107 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22505-201ENSMUST00000082956 108 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22363-201ENSMUST00000083100 108 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm23814-201ENSMUST00000083230 102 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm23095-201ENSMUST00000083446 107 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm14364-201ENSMUST00000129209 267 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm26393-201ENSMUST00000157625 129 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm23558-201ENSMUST00000157823 80 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm24419-201ENSMUST00000157875 332 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm24085-201ENSMUST00000175172 116 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm26200-201ENSMUST00000180273 79 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm22062-201ENSMUST00000082563 107 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm23093-201ENSMUST00000083450 102 ntBASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.23□□□□□ -2.21
Scn2aA0A0J9YTW6 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm24172-201ENSMUST00000104127 117 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm25730-201ENSMUST00000178753 165 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm28740-201ENSMUST00000186142 215 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm24598-201ENSMUST00000122510 74 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm23184-201ENSMUST00000122594 131 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm27396-201ENSMUST00000157708 58 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm25976-201ENSMUST00000158695 130 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm24154-201ENSMUST00000175261 130 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm28437-201ENSMUST00000190277 783 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm43245-201ENSMUST00000197603 468 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm42506-201ENSMUST00000202009 150 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Gm24977-201ENSMUST00000083106 163 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Scn2aA0A0J9YTW6 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm25507-201ENSMUST00000116981 144 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm26278-201ENSMUST00000157098 132 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm24262-201ENSMUST00000157431 144 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm24409-201ENSMUST00000157881 152 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm20689-201ENSMUST00000176033 279 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm23379-201ENSMUST00000180026 107 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Mir6388-201ENSMUST00000184417 75 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm29350-201ENSMUST00000189141 541 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm18775-201ENSMUST00000190763 586 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm25475-201ENSMUST00000082825 180 ntBASIC1.21□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.2□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.2□□□□□ -2.22
Scn2aA0A0J9YTW6 Snord98-201ENSMUST00000116819 65 ntBASIC1.2□□□□□ -2.22
Scn2aA0A0J9YTW6 Gm12351-201ENSMUST00000118727 292 ntBASIC1.2□□□□□ -2.22
Scn2aA0A0J9YTW6 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms