Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm22073-201ENSMUST00000122668 189 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm24895-201ENSMUST00000122742 74 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm14364-201ENSMUST00000129209 267 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm26149-201ENSMUST00000157432 108 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm22315-201ENSMUST00000158010 143 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm24837-201ENSMUST00000158683 81 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm18588-201ENSMUST00000177308 492 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Mir6399-201ENSMUST00000184050 84 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm28343-201ENSMUST00000185386 112 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm29603-201ENSMUST00000186792 334 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm28453-203ENSMUST00000187041 189 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm5001-201ENSMUST00000204361 331 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm2829-201ENSMUST00000213121 499 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm18617-201ENSMUST00000222311 259 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm24412-201ENSMUST00000083426 109 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Snora33-201ENSMUST00000093556 129 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.55□□□□□ -2.16
Snf8Q9CZ28 Gm26474-201ENSMUST00000116762 122 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm22328-201ENSMUST00000158074 112 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm17113-201ENSMUST00000170118 171 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm26501-201ENSMUST00000178307 107 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Mir7017-201ENSMUST00000184894 62 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm37579-201ENSMUST00000194291 142 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm42570-201ENSMUST00000195937 292 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm43245-201ENSMUST00000197603 468 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm45296-201ENSMUST00000209625 205 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Gm45375-201ENSMUST00000210338 280 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Mir148b-201ENSMUST00000083626 97 ntBASIC1.54□□□□□ -2.16
Snf8Q9CZ28 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm23010-201ENSMUST00000104151 126 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm14624-201ENSMUST00000117746 192 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm13457-201ENSMUST00000117885 267 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm15365-201ENSMUST00000122392 300 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm25269-201ENSMUST00000122601 104 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm24481-201ENSMUST00000157210 102 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm34073-201ENSMUST00000195736 212 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm44128-201ENSMUST00000204909 219 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm44564-201ENSMUST00000207985 180 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
Snf8Q9CZ28 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Ear14-201ENSMUST00000049559 468 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm23097-201ENSMUST00000083448 105 ntBASIC1.53□□□□□ -2.16
Snf8Q9CZ28 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm23951-201ENSMUST00000104029 132 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm24172-201ENSMUST00000104127 117 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm12255-201ENSMUST00000117184 284 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm23221-201ENSMUST00000158118 93 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm26335-201ENSMUST00000178449 107 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm9830-201ENSMUST00000178509 357 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm27313-201ENSMUST00000183500 142 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Mir195b-201ENSMUST00000184814 97 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm18433-201ENSMUST00000192747 197 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm40810-201ENSMUST00000219149 253 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm26457-201ENSMUST00000082678 78 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Gm23462-201ENSMUST00000083264 104 ntBASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.52□□□□□ -2.17
Snf8Q9CZ28 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm14355-201ENSMUST00000117352 264 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm14674-201ENSMUST00000117816 342 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm13588-201ENSMUST00000120026 135 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm5396-201ENSMUST00000121222 532 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm25384-201ENSMUST00000157807 105 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm7592-201ENSMUST00000160674 627 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm7953-201ENSMUST00000168278 469 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Mir28b-201ENSMUST00000175399 80 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm21815-201ENSMUST00000178213 664 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm20874-201ENSMUST00000178356 663 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm37054-201ENSMUST00000193481 543 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm43583-201ENSMUST00000199235 303 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 Gm44666-201ENSMUST00000208544 391 ntBASIC1.51□□□□□ -2.17
Snf8Q9CZ28 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 233.7 ms