Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm44870-201ENSMUST00000207291 357 ntBASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 Gm23453-201ENSMUST00000083326 106 ntBASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Rpa3Q9CQ71 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
Rpa3Q9CQ71 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm14937-201ENSMUST00000119709 208 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm25269-201ENSMUST00000122601 104 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm22143-201ENSMUST00000157401 203 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm24942-201ENSMUST00000158328 114 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm22129-201ENSMUST00000179034 107 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm24518-201ENSMUST00000180275 94 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm22229-201ENSMUST00000082987 108 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm24977-201ENSMUST00000083106 163 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.02□□□□□ -2.25
Rpa3Q9CQ71 Gm15214-201ENSMUST00000122155 470 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm26150-201ENSMUST00000157426 151 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm22817-201ENSMUST00000157448 356 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm23317-201ENSMUST00000157999 129 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm25557-201ENSMUST00000158084 315 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm26405-201ENSMUST00000158495 100 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm25956-201ENSMUST00000175115 217 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm20689-201ENSMUST00000176033 279 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm18396-201ENSMUST00000177095 361 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Mir7059-201ENSMUST00000184825 59 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm9156-201ENSMUST00000189660 463 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.01□□□□□ -2.25
Rpa3Q9CQ71 Gm22221-201ENSMUST00000157362 103 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm22164-201ENSMUST00000158413 106 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm24366-201ENSMUST00000175383 86 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm29613-201ENSMUST00000185846 313 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm29544-201ENSMUST00000188860 313 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm28912-201ENSMUST00000189001 234 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm28808-201ENSMUST00000190978 313 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm43245-201ENSMUST00000197603 468 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm43739-201ENSMUST00000198294 307 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm43199-201ENSMUST00000200019 307 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 AC167229.1-201ENSMUST00000220057 469 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 AC164304.1-201ENSMUST00000226920 272 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Rpa3Q9CQ71 Snord96a-201ENSMUST00000082791 81 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Snord118-201ENSMUST00000082965 135 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm22972-201ENSMUST00000083297 131 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Gm45872-201ENSMUST00000209804 1584 ntBASIC1□□□□□ -2.25
Rpa3Q9CQ71 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm12779-201ENSMUST00000121496 143 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm8121-201ENSMUST00000153583 499 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm23120-201ENSMUST00000157654 287 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm25371-201ENSMUST00000158162 101 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm23760-201ENSMUST00000158350 116 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm26173-201ENSMUST00000158416 136 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm24862-201ENSMUST00000179103 79 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm23310-201ENSMUST00000179105 79 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm25461-201ENSMUST00000179293 79 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Mir6380-201ENSMUST00000184334 81 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm42570-201ENSMUST00000195937 292 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 AC167192.4-201ENSMUST00000224087 993 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm26228-201ENSMUST00000082512 107 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm25080-201ENSMUST00000082526 107 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm25079-201ENSMUST00000082529 203 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm24707-201ENSMUST00000082812 107 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm24921-201ENSMUST00000083024 107 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Snora34-201ENSMUST00000083402 138 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Mir340-201ENSMUST00000083483 98 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Gm25518-201ENSMUST00000083864 107 ntBASIC0.99□□□□□ -2.25
Rpa3Q9CQ71 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.98□□□□□ -2.25
Rpa3Q9CQ71 Gm24910-201ENSMUST00000157289 272 ntBASIC0.98□□□□□ -2.25
Rpa3Q9CQ71 Gm22228-201ENSMUST00000157364 101 ntBASIC0.98□□□□□ -2.25
Rpa3Q9CQ71 Gm26004-201ENSMUST00000158804 116 ntBASIC0.98□□□□□ -2.25
Rpa3Q9CQ71 Gm23714-201ENSMUST00000179259 105 ntBASIC0.98□□□□□ -2.25
Rpa3Q9CQ71 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
Rpa3Q9CQ71 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 163.8 ms