Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mir340-201ENSMUST00000083483 98 ntBASIC1.17□□□□□ -2.22
Krt88Q9CPR6 Gm22591-201ENSMUST00000104243 106 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm13672-201ENSMUST00000117554 459 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm22944-201ENSMUST00000158662 133 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm23208-201ENSMUST00000158666 127 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm23967-201ENSMUST00000175062 78 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm42774-201ENSMUST00000198854 283 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm10092-201ENSMUST00000077110 180 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Krt88Q9CPR6 Gm26377-201ENSMUST00000102184 108 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Mir190b-201ENSMUST00000104803 80 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.15□□□□□ -2.23
Krt88Q9CPR6 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm26150-201ENSMUST00000157426 151 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm23317-201ENSMUST00000157999 129 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm22537-201ENSMUST00000158172 199 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm26405-201ENSMUST00000158495 100 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm22851-201ENSMUST00000178741 94 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm25074-201ENSMUST00000178782 94 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm29037-201ENSMUST00000189092 313 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm9156-201ENSMUST00000189660 463 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm44449-201ENSMUST00000203610 153 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Snord118-201ENSMUST00000082965 135 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm24536-201ENSMUST00000083144 107 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm26493-201ENSMUST00000083155 136 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm22972-201ENSMUST00000083297 131 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Gm23245-201ENSMUST00000083370 135 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Snora34-201ENSMUST00000083402 138 ntBASIC1.15□□□□□ -2.23
Krt88Q9CPR6 Mir374b-201ENSMUST00000102314 95 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Gm23336-201ENSMUST00000117023 123 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Gm12806-201ENSMUST00000119384 268 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Gm13804-201ENSMUST00000119552 172 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Gm23120-201ENSMUST00000157654 287 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Mir1967-201ENSMUST00000157789 82 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Gm22551-201ENSMUST00000157795 103 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.14□□□□□ -2.23
Krt88Q9CPR6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm24915-201ENSMUST00000157288 78 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm26049-201ENSMUST00000157313 108 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm22221-201ENSMUST00000157362 103 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm22733-201ENSMUST00000158094 91 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm22074-201ENSMUST00000158595 113 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm28794-201ENSMUST00000185276 136 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm28912-201ENSMUST00000189001 234 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm25475-201ENSMUST00000082825 180 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Gm24268-201ENSMUST00000082990 110 ntBASIC1.13□□□□□ -2.23
Krt88Q9CPR6 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm23015-201ENSMUST00000104145 128 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm22193-201ENSMUST00000116868 76 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm25384-201ENSMUST00000157807 105 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm24418-201ENSMUST00000177597 79 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm24639-201ENSMUST00000178518 79 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm23076-201ENSMUST00000179082 79 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm25077-201ENSMUST00000179157 79 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm23714-201ENSMUST00000179259 105 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Gm32300-201ENSMUST00000221735 515 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.12□□□□□ -2.23
Krt88Q9CPR6 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm14713-201ENSMUST00000122362 686 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Rnu7-201ENSMUST00000158458 62 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm24084-201ENSMUST00000175173 137 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm23725-201ENSMUST00000177876 107 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm22263-201ENSMUST00000180060 104 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm16399-201ENSMUST00000181423 219 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm29613-201ENSMUST00000185846 313 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm29544-201ENSMUST00000188860 313 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm28808-201ENSMUST00000190978 313 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.11□□□□□ -2.23
Krt88Q9CPR6 Gm17906-201ENSMUST00000202480 901 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 343.3 ms