Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm25392-201ENSMUST00000157335 297 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm24291-201ENSMUST00000157633 162 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm26088-201ENSMUST00000157896 131 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm24846-201ENSMUST00000158033 108 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm23933-201ENSMUST00000178405 79 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm23860-201ENSMUST00000179446 132 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Mir3068-202ENSMUST00000197755 79 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm42672-201ENSMUST00000197821 352 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm45150-201ENSMUST00000206051 467 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm9795-201ENSMUST00000062156 693 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm22294-201ENSMUST00000083308 104 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm12042-201ENSMUST00000120479 301 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm24908-201ENSMUST00000157294 127 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm27396-201ENSMUST00000157708 58 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm25066-201ENSMUST00000158145 123 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm22527-201ENSMUST00000158816 106 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm4468-201ENSMUST00000170206 294 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm25749-201ENSMUST00000175485 111 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm22118-201ENSMUST00000175593 171 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm20630-201ENSMUST00000177387 551 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm44476-201ENSMUST00000196225 91 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Mir376a-201ENSMUST00000197584 68 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm44429-201ENSMUST00000203542 186 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.2□□□□□ -1.9
Brf1Q8CFK2 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm10025-201ENSMUST00000079568 372 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Brf1Q8CFK2 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm23202-201ENSMUST00000104376 129 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm25805-201ENSMUST00000122788 108 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm25454-201ENSMUST00000157947 315 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm25373-201ENSMUST00000158156 115 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Mir3965-201ENSMUST00000175570 69 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm20660-201ENSMUST00000177515 289 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm27470-201ENSMUST00000184070 210 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm27505-201ENSMUST00000185071 110 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm44399-201ENSMUST00000205043 226 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm44853-201ENSMUST00000209070 250 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.19□□□□□ -1.9
Brf1Q8CFK2 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm14069-201ENSMUST00000120815 229 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm25808-201ENSMUST00000122784 284 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm23589-201ENSMUST00000157660 105 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm24958-201ENSMUST00000158009 97 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm22315-201ENSMUST00000158010 143 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm24818-201ENSMUST00000175093 161 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm28282-201ENSMUST00000186072 186 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm19257-201ENSMUST00000186121 183 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm42739-201ENSMUST00000200687 226 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm19563-201ENSMUST00000222031 270 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Brf1Q8CFK2 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Brf1Q8CFK2 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Gm24423-201ENSMUST00000101982 106 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Gm22270-201ENSMUST00000104034 132 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Gm14803-201ENSMUST00000117163 361 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Gm22027-201ENSMUST00000122737 127 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Mir6336-201ENSMUST00000183581 130 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Trbv6-201ENSMUST00000193743 276 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.17□□□□□ -1.9
Brf1Q8CFK2 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Brf1Q8CFK2 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm14073-201ENSMUST00000117344 381 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm11253-201ENSMUST00000118486 201 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm12771-201ENSMUST00000120246 135 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm14846-201ENSMUST00000121868 216 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm25333-201ENSMUST00000158035 246 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm26287-201ENSMUST00000158887 81 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm27545-201ENSMUST00000184755 202 ntBASIC3.16□□□□□ -1.9
Brf1Q8CFK2 Gm37807-201ENSMUST00000194310 190 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 177.4 ms