Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm23183-201ENSMUST00000122595 323 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Gm25716-201ENSMUST00000158628 104 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Gm20399-201ENSMUST00000174652 132 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Gm25933-201ENSMUST00000178943 108 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Gm28344-201ENSMUST00000185704 279 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.63□□□□□ -1.83
Ubp1Q811S7 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Gm44425-201ENSMUST00000203739 429 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ubp1Q811S7 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ubp1Q811S7 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Ubp1Q811S7 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.63□□□□□ -1.83
Ubp1Q811S7 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ubp1Q811S7 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm22658-201ENSMUST00000104196 155 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm13885-201ENSMUST00000117569 187 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm24896-201ENSMUST00000122741 135 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm23101-201ENSMUST00000157550 137 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm24905-201ENSMUST00000158129 104 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm22075-201ENSMUST00000158599 192 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm22476-201ENSMUST00000158902 100 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm44182-201ENSMUST00000204052 115 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.62□□□□□ -1.83
Ubp1Q811S7 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ubp1Q811S7 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ubp1Q811S7 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ubp1Q811S7 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ubp1Q811S7 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm24792-201ENSMUST00000104286 128 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm24598-201ENSMUST00000122510 74 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Snord11-201ENSMUST00000158468 84 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Mir28b-201ENSMUST00000175399 80 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm27392-201ENSMUST00000185041 101 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm37037-201ENSMUST00000194475 424 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm44887-201ENSMUST00000208980 178 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm10025-201ENSMUST00000079568 372 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm25205-201ENSMUST00000082841 103 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Snora31-201ENSMUST00000083213 130 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm22972-201ENSMUST00000083297 131 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.61□□□□□ -1.83
Ubp1Q811S7 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ubp1Q811S7 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Ubp1Q811S7 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm23588-201ENSMUST00000157659 99 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Mir1951-201ENSMUST00000157981 89 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm22381-201ENSMUST00000158186 107 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm26405-201ENSMUST00000158495 100 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm27903-201ENSMUST00000175482 126 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm4479-201ENSMUST00000178807 171 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm28010-201ENSMUST00000179485 126 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm44256-201ENSMUST00000203304 335 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Gm25800-201ENSMUST00000082636 134 ntBASIC3.6□□□□□ -1.83
Ubp1Q811S7 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm23697-201ENSMUST00000103897 110 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Snord89-201ENSMUST00000104516 110 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Mir291a-201ENSMUST00000104815 82 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm25961-201ENSMUST00000157174 135 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm23194-201ENSMUST00000158813 105 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm20613-201ENSMUST00000175828 345 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm26097-201ENSMUST00000179642 93 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm5829-201ENSMUST00000191383 351 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm43899-201ENSMUST00000203675 246 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm26493-201ENSMUST00000083155 136 ntBASIC3.59□□□□□ -1.83
Ubp1Q811S7 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Ubp1Q811S7 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ubp1Q811S7 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.59□□□□□ -1.84
Ubp1Q811S7 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Ubp1Q811S7 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ubp1Q811S7 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Ubp1Q811S7 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ubp1Q811S7 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm12513-201ENSMUST00000118617 352 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm12335-201ENSMUST00000119738 327 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm12897-201ENSMUST00000120341 250 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm11471-201ENSMUST00000121824 198 ntBASIC3.58□□□□□ -1.84
Ubp1Q811S7 Gm24505-201ENSMUST00000157682 126 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms