Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm30534-201ENSMUST00000217928 207 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm10222-201ENSMUST00000088336 294 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.03□□□□□ -2.09
Upk3bQ80YF6 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Upk3bQ80YF6 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm22023-201ENSMUST00000104354 130 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm13672-201ENSMUST00000117554 459 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm14792-201ENSMUST00000119725 258 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm15213-201ENSMUST00000122098 216 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm22654-201ENSMUST00000157874 105 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm6788-201ENSMUST00000166459 270 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm6660-201ENSMUST00000179149 468 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm28825-201ENSMUST00000186233 238 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm42570-201ENSMUST00000195937 292 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Mir7232-201ENSMUST00000197929 74 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Mir3069-201ENSMUST00000198802 65 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm43217-201ENSMUST00000199513 367 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.02□□□□□ -2.09
Upk3bQ80YF6 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm23625-201ENSMUST00000082457 100 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm23723-201ENSMUST00000082996 132 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm26494-201ENSMUST00000083154 143 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm24493-201ENSMUST00000083805 143 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.02□□□□□ -2.09
Upk3bQ80YF6 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm25943-201ENSMUST00000103791 90 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Mir466b-7-201ENSMUST00000103804 88 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Mir466b-5-201ENSMUST00000103900 88 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm14652-201ENSMUST00000118479 235 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm12646-201ENSMUST00000119144 238 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm6574-201ENSMUST00000120037 362 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm14782-201ENSMUST00000120151 195 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm13862-201ENSMUST00000121220 197 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm12443-201ENSMUST00000122308 323 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm26256-201ENSMUST00000122499 186 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Mir466b-4-201ENSMUST00000178801 90 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm25285-201ENSMUST00000178951 90 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Mir466b-6-201ENSMUST00000180061 90 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Mir466c-2-201ENSMUST00000180211 90 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Mir6355-201ENSMUST00000183687 106 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm27997-201ENSMUST00000184942 69 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm20058-201ENSMUST00000186939 284 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm45288-201ENSMUST00000210236 151 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm10025-201ENSMUST00000079568 372 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm23731-201ENSMUST00000083749 107 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Upk3bQ80YF6 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.01□□□□□ -2.09
Upk3bQ80YF6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Upk3bQ80YF6 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Upk3bQ80YF6 Mir682-201ENSMUST00000102281 96 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm24126-201ENSMUST00000104111 106 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm24670-201ENSMUST00000104154 132 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm6954-201ENSMUST00000117416 225 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm12071-201ENSMUST00000121968 469 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm15466-201ENSMUST00000122299 333 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm25321-201ENSMUST00000122558 102 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm26280-201ENSMUST00000157096 101 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm26186-201ENSMUST00000157689 125 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm24501-201ENSMUST00000158452 62 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm24056-201ENSMUST00000158617 146 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm8580-201ENSMUST00000160295 464 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm22192-201ENSMUST00000175128 85 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm23933-201ENSMUST00000178405 79 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm27747-201ENSMUST00000184707 85 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm43250-201ENSMUST00000196536 273 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm44473-201ENSMUST00000204039 152 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2□□□□□ -2.09
Upk3bQ80YF6 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2□□□□□ -2.09
Upk3bQ80YF6 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Upk3bQ80YF6 AC163033.1-201ENSMUST00000218608 157 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 AC165157.3-201ENSMUST00000220815 103 ntBASIC2□□□□□ -2.09
Upk3bQ80YF6 n-R5s40-201ENSMUST00000082475 124 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms