Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm23813-201ENSMUST00000175153 77 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm19932-201ENSMUST00000177033 313 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm27399-201ENSMUST00000184250 78 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm37054-201ENSMUST00000193481 543 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm44181-201ENSMUST00000203106 483 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm23614-201ENSMUST00000082598 107 ntBASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trav7-2Q5R1I3 Gm13475-201ENSMUST00000119290 234 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Gm11471-201ENSMUST00000121824 198 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Gm44477-201ENSMUST00000199661 110 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Gm45878-201ENSMUST00000211839 241 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Gm24037-201ENSMUST00000082871 180 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Gm24977-201ENSMUST00000083106 163 ntBASIC1.51□□□□□ -2.17
Trav7-2Q5R1I3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm25529-201ENSMUST00000104850 92 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm12956-201ENSMUST00000122184 414 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm25543-201ENSMUST00000122678 312 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm24857-201ENSMUST00000158061 310 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm22727-201ENSMUST00000158090 116 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm24005-201ENSMUST00000158459 296 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Mir7016-201ENSMUST00000184308 72 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm28848-201ENSMUST00000189984 168 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Mir1291-201ENSMUST00000199842 117 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm44938-201ENSMUST00000208614 427 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm22972-201ENSMUST00000083297 131 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Snora34-201ENSMUST00000083402 138 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm26314-201ENSMUST00000083891 107 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm3867-201ENSMUST00000086108 279 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm10360-201ENSMUST00000097219 272 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.5□□□□□ -2.17
Trav7-2Q5R1I3 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm26249-201ENSMUST00000116708 118 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm25773-201ENSMUST00000116718 127 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm15067-201ENSMUST00000119534 156 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm23172-201ENSMUST00000157160 124 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm27926-201ENSMUST00000157180 66 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 U6.1-201ENSMUST00000157443 101 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm24358-201ENSMUST00000158424 288 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm16038-201ENSMUST00000159317 193 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm16162-201ENSMUST00000162296 297 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm18546-201ENSMUST00000197245 676 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm25801-201ENSMUST00000082638 106 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Gm25579-201ENSMUST00000083407 106 ntBASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trav7-2Q5R1I3 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm12351-201ENSMUST00000118727 292 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm25460-201ENSMUST00000157954 127 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm25486-201ENSMUST00000158726 63 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm23342-201ENSMUST00000158958 115 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Snord87-201ENSMUST00000175437 87 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm22510-201ENSMUST00000179304 79 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm26336-201ENSMUST00000179449 79 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm26390-201ENSMUST00000179628 79 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm27511-201ENSMUST00000183502 127 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Mir6995-201ENSMUST00000183658 71 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Mir6950-201ENSMUST00000184438 73 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm29005-201ENSMUST00000186773 320 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Gm44465-201ENSMUST00000199536 114 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.48□□□□□ -2.17
Trav7-2Q5R1I3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 182 ms