Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Gm3027-201ENSMUST00000167579 451 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Gm43510-201ENSMUST00000197922 353 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Gm18453-201ENSMUST00000208000 626 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Gm18000-201ENSMUST00000212153 800 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Gm45704-201ENSMUST00000212582 403 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Gm7240-201ENSMUST00000220769 664 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Gm26111-201ENSMUST00000083969 106 ntBASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trim58Q5NCC9 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Mir3096-201ENSMUST00000116685 71 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm15714-201ENSMUST00000117168 250 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm11859-201ENSMUST00000118099 455 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm6444-201ENSMUST00000119611 458 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm24716-201ENSMUST00000157524 104 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm24056-201ENSMUST00000158617 146 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm27410-201ENSMUST00000183851 115 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Mir7667-201ENSMUST00000183866 63 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Mir6997-201ENSMUST00000184313 71 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Mir195b-201ENSMUST00000184814 97 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm37361-201ENSMUST00000194345 132 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm43624-201ENSMUST00000197368 180 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm44468-201ENSMUST00000199516 105 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm45673-201ENSMUST00000210293 358 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm24623-201ENSMUST00000082616 194 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm22443-201ENSMUST00000082890 107 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Gm22287-201ENSMUST00000083197 107 ntBASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trim58Q5NCC9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trim58Q5NCC9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm12513-201ENSMUST00000118617 352 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm25113-201ENSMUST00000157185 143 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm22085-201ENSMUST00000158344 110 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm24085-201ENSMUST00000175172 116 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm22264-201ENSMUST00000178200 107 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm43238-201ENSMUST00000196463 359 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm44524-201ENSMUST00000203899 271 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm5023-201ENSMUST00000217442 587 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm33654-201ENSMUST00000221704 215 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 Gm21937-201ENSMUST00000222825 218 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.18□□□□□ -2.06
Trim58Q5NCC9 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm23109-201ENSMUST00000116867 126 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm26255-201ENSMUST00000122492 103 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm25325-201ENSMUST00000122559 86 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm6956-201ENSMUST00000134724 546 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm26102-201ENSMUST00000157251 284 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm22435-201ENSMUST00000158552 128 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm22308-201ENSMUST00000177609 107 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Mir7679-201ENSMUST00000183379 63 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Mir6951-201ENSMUST00000183910 75 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm37923-201ENSMUST00000191624 161 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm3724-201ENSMUST00000197957 349 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm19118-201ENSMUST00000222554 98 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm22997-201ENSMUST00000082845 107 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm23453-201ENSMUST00000083326 106 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Gm23345-201ENSMUST00000083817 150 ntBASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trim58Q5NCC9 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm11798-201ENSMUST00000119150 421 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm13396-201ENSMUST00000120617 271 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm25279-201ENSMUST00000122608 133 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm24911-201ENSMUST00000157292 136 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim58Q5NCC9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 300.3 ms