Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm25495-201ENSMUST00000104431 131 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm12053-201ENSMUST00000119022 252 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm22510-201ENSMUST00000179304 79 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm26336-201ENSMUST00000179449 79 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm26390-201ENSMUST00000179628 79 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm43245-201ENSMUST00000197603 468 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm43739-201ENSMUST00000198294 307 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm44449-201ENSMUST00000203610 153 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm44336-201ENSMUST00000203696 468 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm44654-201ENSMUST00000208052 329 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Snora3-201ENSMUST00000083082 132 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm20541-201ENSMUST00000173035 1406 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.28□□□□□ -2.2
Upf3bQ3ULL6 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.28□□□□□ -2.21
Upf3bQ3ULL6 Gm15443-201ENSMUST00000118947 820 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm12417-201ENSMUST00000119153 403 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm23170-201ENSMUST00000157158 106 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm22485-201ENSMUST00000157990 109 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm24229-201ENSMUST00000158830 118 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm23777-201ENSMUST00000158994 259 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm3111-201ENSMUST00000167426 490 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm23145-201ENSMUST00000178912 79 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Gm27711-201ENSMUST00000183802 118 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.27□□□□□ -2.21
Upf3bQ3ULL6 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm12806-201ENSMUST00000119384 268 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm23083-201ENSMUST00000157851 116 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm23854-201ENSMUST00000158378 108 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm23339-201ENSMUST00000158962 139 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Traj60-201ENSMUST00000167781 54 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm23967-201ENSMUST00000175062 78 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm25956-201ENSMUST00000175115 217 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm17906-201ENSMUST00000202480 901 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm25475-201ENSMUST00000082825 180 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm24977-201ENSMUST00000083106 163 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Mir221-201ENSMUST00000083488 95 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.26□□□□□ -2.21
Upf3bQ3ULL6 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Gm12639-201ENSMUST00000121400 493 ntBASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Gm26363-201ENSMUST00000158866 83 ntBASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Gm22980-201ENSMUST00000082608 70 ntBASIC1.25□□□□□ -2.21
Upf3bQ3ULL6 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Mir343-201ENSMUST00000102360 75 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm15719-201ENSMUST00000120619 635 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm26150-201ENSMUST00000157426 151 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm23352-201ENSMUST00000158428 64 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm26029-201ENSMUST00000158659 132 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm22663-201ENSMUST00000158721 102 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm23025-201ENSMUST00000158769 111 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm22851-201ENSMUST00000178741 94 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm25074-201ENSMUST00000178782 94 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Mir7675-201ENSMUST00000184262 58 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm40810-201ENSMUST00000219149 253 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Gm22972-201ENSMUST00000083297 131 ntBASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
Upf3bQ3ULL6 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm22780-201ENSMUST00000104084 132 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm23907-201ENSMUST00000104595 189 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm26249-201ENSMUST00000116708 118 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm25423-201ENSMUST00000157609 107 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm22551-201ENSMUST00000157795 103 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm23317-201ENSMUST00000157999 129 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm26405-201ENSMUST00000158495 100 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm23208-201ENSMUST00000158666 127 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm26004-201ENSMUST00000158804 116 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.23□□□□□ -2.21
Upf3bQ3ULL6 Gm24084-201ENSMUST00000175173 137 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms