Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Brf1Q8CFK2 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm25269-201ENSMUST00000122601 104 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm24415-201ENSMUST00000180218 107 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm25528-201ENSMUST00000180264 132 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm27786-201ENSMUST00000184337 70 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm28744-201ENSMUST00000189939 340 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm37428-201ENSMUST00000193886 137 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm46997-201ENSMUST00000222108 217 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Brf1Q8CFK2 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Brf1Q8CFK2 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Gm25875-201ENSMUST00000104323 107 ntBASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Mir872-201ENSMUST00000104728 81 ntBASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Gm11356-201ENSMUST00000118974 192 ntBASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Gm26479-201ENSMUST00000122620 106 ntBASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Gm25543-201ENSMUST00000122678 312 ntBASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Gm28921-201ENSMUST00000190219 378 ntBASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.27□□□□□ -1.89
Brf1Q8CFK2 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm11460-201ENSMUST00000118200 361 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm15002-201ENSMUST00000118406 452 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm24627-201ENSMUST00000122764 138 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm24601-201ENSMUST00000157970 143 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm24878-201ENSMUST00000158782 104 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm27330-201ENSMUST00000184689 132 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm27694-201ENSMUST00000184740 86 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm34314-201ENSMUST00000203622 367 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm23264-201ENSMUST00000083372 107 ntBASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Brf1Q8CFK2 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm23128-201ENSMUST00000104257 132 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm25316-201ENSMUST00000116826 118 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm16171-201ENSMUST00000118004 324 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm23716-201ENSMUST00000157348 144 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm26186-201ENSMUST00000157689 125 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm22316-201ENSMUST00000158012 216 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm24082-201ENSMUST00000175175 83 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm29140-201ENSMUST00000190187 476 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm23128-202ENSMUST00000196578 133 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm22249-201ENSMUST00000082485 136 ntBASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Brf1Q8CFK2 Gm24582-201ENSMUST00000103967 103 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm24079-201ENSMUST00000104352 132 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm23175-201ENSMUST00000104371 132 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm14782-201ENSMUST00000120151 195 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm13992-201ENSMUST00000120558 156 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm24716-201ENSMUST00000157524 104 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm22538-201ENSMUST00000158169 299 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm23258-201ENSMUST00000158319 106 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm23268-201ENSMUST00000175494 78 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Mir7667-201ENSMUST00000183866 63 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm45687-201ENSMUST00000209454 155 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm45879-201ENSMUST00000212521 392 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Gm24356-201ENSMUST00000082859 106 ntBASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Brf1Q8CFK2 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Gm23747-201ENSMUST00000104228 131 ntBASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Gm22984-201ENSMUST00000122751 122 ntBASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Gm23476-201ENSMUST00000158881 274 ntBASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Mir6402-201ENSMUST00000183406 80 ntBASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Gm44526-201ENSMUST00000204664 121 ntBASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Gm5899-201ENSMUST00000071770 270 ntBASIC3.23□□□□□ -1.89
Brf1Q8CFK2 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Gm12686-201ENSMUST00000120546 397 ntBASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Gm14770-201ENSMUST00000122197 312 ntBASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Gm26215-201ENSMUST00000158584 139 ntBASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Gm37089-201ENSMUST00000195616 129 ntBASIC3.22□□□□□ -1.89
Brf1Q8CFK2 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Gm7065-201ENSMUST00000222150 474 ntBASIC3.22□□□□□ -1.89
Brf1Q8CFK2 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Brf1Q8CFK2 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Brf1Q8CFK2 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Mdga2-203ENSMUST00000113942 423 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm11285-201ENSMUST00000118443 322 ntBASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.21□□□□□ -1.9
Brf1Q8CFK2 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 164.7 ms