Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm44478-201ENSMUST00000204875 114 ntBASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.06□□□□□ -2.08
Upk3bQ80YF6 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Gm4945-201ENSMUST00000075152 453 ntBASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Gm22443-201ENSMUST00000082890 107 ntBASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Gm23727-201ENSMUST00000083352 164 ntBASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Gm23247-201ENSMUST00000083373 107 ntBASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Gm25628-201ENSMUST00000084002 105 ntBASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Upk3bQ80YF6 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm11460-201ENSMUST00000118200 361 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm12647-201ENSMUST00000118977 265 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm25270-201ENSMUST00000122606 138 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm23642-201ENSMUST00000157858 258 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm25333-201ENSMUST00000158035 246 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm22308-201ENSMUST00000177609 107 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm25528-201ENSMUST00000180264 132 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Mir7667-201ENSMUST00000183866 63 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Mir6346-201ENSMUST00000183982 81 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm28358-202ENSMUST00000189292 223 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm36891-201ENSMUST00000191995 655 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm38060-201ENSMUST00000194822 464 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm43286-201ENSMUST00000197420 424 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm43583-201ENSMUST00000199235 303 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm43264-201ENSMUST00000202284 325 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm44519-201ENSMUST00000206486 122 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm44960-201ENSMUST00000207403 141 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Upk3bQ80YF6 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm22997-201ENSMUST00000082845 107 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm23453-201ENSMUST00000083326 106 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm26329-201ENSMUST00000093723 110 ntBASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.05□□□□□ -2.08
Upk3bQ80YF6 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm26154-201ENSMUST00000102339 96 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm13378-201ENSMUST00000117483 336 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm2830-201ENSMUST00000140330 385 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm24729-201ENSMUST00000158225 137 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Mir1927-201ENSMUST00000158579 109 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm25162-201ENSMUST00000158906 159 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm22621-201ENSMUST00000179678 74 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Mir6402-201ENSMUST00000183406 80 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm27521-201ENSMUST00000184022 64 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm27694-201ENSMUST00000184740 86 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm29665-201ENSMUST00000191457 528 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm37338-201ENSMUST00000191986 127 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Mir376a-201ENSMUST00000197584 68 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm43914-201ENSMUST00000203592 594 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm45344-201ENSMUST00000211610 341 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm23845-201ENSMUST00000083834 152 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm26314-201ENSMUST00000083891 107 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Upk3bQ80YF6 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm24582-201ENSMUST00000103967 103 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm22115-201ENSMUST00000103976 133 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm23923-201ENSMUST00000104108 133 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm23836-201ENSMUST00000104434 129 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm11794-201ENSMUST00000119446 237 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm14588-201ENSMUST00000119895 172 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm24630-201ENSMUST00000122768 106 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm25808-201ENSMUST00000122784 284 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm23588-201ENSMUST00000157659 99 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm24210-201ENSMUST00000158263 133 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm25643-201ENSMUST00000158874 103 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm27220-201ENSMUST00000183453 262 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Mir6907-201ENSMUST00000183764 71 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm45313-201ENSMUST00000210584 178 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 Gm18000-201ENSMUST00000212153 800 ntBASIC2.03□□□□□ -2.08
Upk3bQ80YF6 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms