Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm43914-201ENSMUST00000203592 594 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.35□□□□□ -2.19
Upf3bQ3ULL6 Gm11857-201ENSMUST00000119817 324 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm11359-201ENSMUST00000120039 567 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm14366-201ENSMUST00000121970 730 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm20613-201ENSMUST00000175828 345 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm27490-201ENSMUST00000184754 128 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm37709-201ENSMUST00000195074 600 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm9402-201ENSMUST00000196849 388 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm44308-201ENSMUST00000197080 99 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.34□□□□□ -2.19
Upf3bQ3ULL6 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.34□□□□□ -2.2
Upf3bQ3ULL6 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm24865-201ENSMUST00000103246 96 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm14793-201ENSMUST00000118739 311 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm25269-201ENSMUST00000122601 104 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm6956-201ENSMUST00000134724 546 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm24481-201ENSMUST00000157210 102 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm23267-201ENSMUST00000178490 132 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm44655-201ENSMUST00000207768 423 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Mir211-201ENSMUST00000083651 106 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm22577-201ENSMUST00000083731 109 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Gm25409-201ENSMUST00000083764 131 ntBASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Upf3bQ3ULL6 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm11606-201ENSMUST00000120706 617 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm22862-201ENSMUST00000178593 121 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm37599-201ENSMUST00000193067 489 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm42570-201ENSMUST00000195937 292 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm18546-201ENSMUST00000197245 676 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Mir1291-201ENSMUST00000199842 117 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm44135-201ENSMUST00000205221 368 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Gm45907-201ENSMUST00000213023 193 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.32□□□□□ -2.2
Upf3bQ3ULL6 Mir653-201ENSMUST00000102402 85 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Gm24598-201ENSMUST00000122510 74 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Gm20438-201ENSMUST00000174441 329 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Mir3098-201ENSMUST00000175416 87 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Mir7063-201ENSMUST00000184158 91 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Gm22572-201ENSMUST00000082985 105 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Gm24268-201ENSMUST00000082990 110 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Mir340-201ENSMUST00000083483 98 ntBASIC1.31□□□□□ -2.2
Upf3bQ3ULL6 Gm22559-201ENSMUST00000157329 134 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Gm23124-201ENSMUST00000157650 107 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Gm22733-201ENSMUST00000158094 91 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Mir6419-201ENSMUST00000184784 113 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Gm45375-201ENSMUST00000210338 280 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Upf3bQ3ULL6 Gm25759-201ENSMUST00000103988 129 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm13804-201ENSMUST00000119552 172 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm12512-201ENSMUST00000119620 217 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm22817-201ENSMUST00000157448 356 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm24851-201ENSMUST00000158028 103 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm24418-201ENSMUST00000177597 79 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm24639-201ENSMUST00000178518 79 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm23076-201ENSMUST00000179082 79 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm25077-201ENSMUST00000179157 79 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm31230-201ENSMUST00000199725 785 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.29□□□□□ -2.2
Upf3bQ3ULL6 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms