Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44726-201ENSMUST00000203427 217 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm44938-201ENSMUST00000208614 427 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm25788-201ENSMUST00000082721 131 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.91□□□□□ -2.1
Trim3Q9R1R2 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm24098-201ENSMUST00000102075 109 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm25381-201ENSMUST00000102078 109 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm15215-201ENSMUST00000117773 489 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm15067-201ENSMUST00000119534 156 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm14402-201ENSMUST00000122217 508 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trim3Q9R1R2 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm25658-201ENSMUST00000158472 128 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm22664-201ENSMUST00000158719 105 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm25020-201ENSMUST00000178071 107 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm43739-201ENSMUST00000198294 307 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Mir300-201ENSMUST00000083485 79 ntBASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trim3Q9R1R2 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm24984-201ENSMUST00000104454 133 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm25113-201ENSMUST00000157185 143 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm25012-201ENSMUST00000158396 164 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm17148-201ENSMUST00000164702 249 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm24388-201ENSMUST00000177872 107 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm25457-201ENSMUST00000179509 107 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.89□□□□□ -2.11
Trim3Q9R1R2 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm20102-201ENSMUST00000222445 220 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Gm23614-201ENSMUST00000082598 107 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Mir322-201ENSMUST00000083484 95 ntBASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trim3Q9R1R2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm26077-201ENSMUST00000104064 123 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm24172-201ENSMUST00000104127 117 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Mir669d-201ENSMUST00000104644 121 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm13457-201ENSMUST00000117885 267 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm25625-201ENSMUST00000157221 96 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm22328-201ENSMUST00000158074 112 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm16584-201ENSMUST00000159267 189 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm21978-201ENSMUST00000179696 377 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Mir7016-201ENSMUST00000184308 72 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm44881-201ENSMUST00000205425 367 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm45386-201ENSMUST00000210194 218 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm45815-201ENSMUST00000220241 146 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Mir222-201ENSMUST00000083537 79 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.88□□□□□ -2.11
Trim3Q9R1R2 Gm11935-201ENSMUST00000118608 399 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm23331-201ENSMUST00000157423 108 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm23381-201ENSMUST00000157676 94 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm24419-201ENSMUST00000157875 332 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm24409-201ENSMUST00000157881 152 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm23548-201ENSMUST00000158963 106 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm22264-201ENSMUST00000178200 107 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Mir7226-201ENSMUST00000184953 60 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm46312-201ENSMUST00000220961 420 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm24623-201ENSMUST00000082616 194 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm24037-201ENSMUST00000082871 180 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm23453-201ENSMUST00000083326 106 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm25207-201ENSMUST00000093745 107 ntBASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trim3Q9R1R2 Gm14215-201ENSMUST00000120578 221 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm14287-201ENSMUST00000121060 117 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm14530-201ENSMUST00000122391 333 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm25054-201ENSMUST00000157370 97 ntBASIC1.86□□□□□ -2.11
Trim3Q9R1R2 Gm26345-201ENSMUST00000157534 120 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms