Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm21937-201ENSMUST00000222825 218 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Rpa3Q9CQ71 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm12417-201ENSMUST00000119153 403 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm12507-201ENSMUST00000119155 415 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm14972-201ENSMUST00000121780 364 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm24892-201ENSMUST00000122747 104 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm26271-201ENSMUST00000158349 104 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm22136-201ENSMUST00000158751 268 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm23339-201ENSMUST00000158962 139 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm20613-201ENSMUST00000175828 345 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm23090-201ENSMUST00000177331 78 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm23568-201ENSMUST00000177960 92 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm24829-201ENSMUST00000179245 92 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Mir7009-201ENSMUST00000184519 64 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm28688-201ENSMUST00000187301 268 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Gm45907-201ENSMUST00000213023 193 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Rpa3Q9CQ71 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm15010-201ENSMUST00000117153 407 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm14793-201ENSMUST00000118739 311 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm14366-201ENSMUST00000121970 730 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm25784-201ENSMUST00000122524 81 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm23331-201ENSMUST00000157423 108 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm24306-201ENSMUST00000180229 79 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm27419-201ENSMUST00000184576 109 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm37727-201ENSMUST00000191637 819 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 Gm45456-201ENSMUST00000210841 243 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.12□□□□□ -2.23
Rpa3Q9CQ71 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm24430-201ENSMUST00000104077 104 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm25423-201ENSMUST00000157609 107 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm23589-201ENSMUST00000157660 105 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm16588-201ENSMUST00000162889 355 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm9402-201ENSMUST00000196849 388 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm18971-201ENSMUST00000197240 374 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm18546-201ENSMUST00000197245 676 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm44011-201ENSMUST00000203336 394 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm43914-201ENSMUST00000203592 594 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm19441-201ENSMUST00000221545 330 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Gm23245-201ENSMUST00000083370 135 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Mir221-201ENSMUST00000083488 95 ntBASIC1.11□□□□□ -2.23
Rpa3Q9CQ71 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm15266-201ENSMUST00000119635 255 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm22537-201ENSMUST00000158172 199 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm22944-201ENSMUST00000158662 133 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm20438-201ENSMUST00000174441 329 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm28200-201ENSMUST00000187778 315 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm29378-201ENSMUST00000188723 315 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm28909-201ENSMUST00000189406 315 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm37599-201ENSMUST00000193067 489 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm42774-201ENSMUST00000198854 283 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm44336-201ENSMUST00000203696 468 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm46993-201ENSMUST00000220708 259 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm9973-202ENSMUST00000220926 166 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm25589-201ENSMUST00000082502 166 ntBASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Rpa3Q9CQ71 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Gm25162-201ENSMUST00000158906 159 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Gm22510-201ENSMUST00000179304 79 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Gm26336-201ENSMUST00000179449 79 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Gm26390-201ENSMUST00000179628 79 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Gm44655-201ENSMUST00000207768 423 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Rpa3Q9CQ71 BC022960-201ENSMUST00000119987 1815 ntBASIC1.08□□□□□ -2.24
Rpa3Q9CQ71 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.08□□□□□ -2.24
Rpa3Q9CQ71 Gm25768-201ENSMUST00000158570 98 ntBASIC1.08□□□□□ -2.24
Rpa3Q9CQ71 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 193.3 ms