Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.34□□□□□ -1.88
Brf1Q8CFK2 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm15010-201ENSMUST00000117153 407 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm22026-201ENSMUST00000122735 281 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm23668-201ENSMUST00000157465 111 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm23559-201ENSMUST00000157824 103 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm22330-201ENSMUST00000158068 115 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm24799-201ENSMUST00000178431 79 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm28848-201ENSMUST00000189984 168 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Gm43978-201ENSMUST00000203491 451 ntBASIC3.33□□□□□ -1.88
Brf1Q8CFK2 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.33□□□□□ -1.88
Brf1Q8CFK2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm13581-201ENSMUST00000120675 278 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm14402-201ENSMUST00000122217 508 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm24726-201ENSMUST00000158232 121 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Snora15-201ENSMUST00000177461 131 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm26200-201ENSMUST00000180273 79 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Mir6370-201ENSMUST00000183510 120 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm44977-201ENSMUST00000205283 420 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm44600-201ENSMUST00000208540 111 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm22358-201ENSMUST00000082877 122 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm25188-201ENSMUST00000083913 122 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Gm26327-201ENSMUST00000093724 111 ntBASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Brf1Q8CFK2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm25565-201ENSMUST00000104605 105 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm15215-201ENSMUST00000117773 489 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm12646-201ENSMUST00000119144 238 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm24729-201ENSMUST00000158225 137 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm24308-201ENSMUST00000177773 114 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm22621-201ENSMUST00000179678 74 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Mir7242-201ENSMUST00000183710 79 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm18015-201ENSMUST00000214879 316 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm24152-201ENSMUST00000082764 163 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm22443-201ENSMUST00000082890 107 ntBASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Brf1Q8CFK2 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Brf1Q8CFK2 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm14894-201ENSMUST00000117170 270 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm13432-201ENSMUST00000118861 241 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm5937-201ENSMUST00000119715 643 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm16021-201ENSMUST00000121176 219 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm13210-201ENSMUST00000121483 273 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm15065-201ENSMUST00000121699 273 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm12815-201ENSMUST00000121737 135 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm12443-201ENSMUST00000122308 323 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm23409-201ENSMUST00000158516 237 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Snord53-201ENSMUST00000175146 78 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm25470-201ENSMUST00000175576 111 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Mir7k-201ENSMUST00000184115 110 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm5329-201ENSMUST00000186898 463 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm28849-201ENSMUST00000188127 174 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm28330-201ENSMUST00000190353 171 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm37449-201ENSMUST00000193016 270 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm18658-201ENSMUST00000195558 270 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm44393-201ENSMUST00000197418 138 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm26458-201ENSMUST00000082832 128 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm25410-201ENSMUST00000083758 137 ntBASIC3.3□□□□□ -1.88
Brf1Q8CFK2 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm13714-201ENSMUST00000117313 221 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm15211-201ENSMUST00000118932 528 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm15466-201ENSMUST00000122299 333 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm22651-201ENSMUST00000157872 94 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm24736-201ENSMUST00000158862 130 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Mir3106-201ENSMUST00000175401 82 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm20058-201ENSMUST00000186939 284 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm37281-201ENSMUST00000192412 439 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm42578-201ENSMUST00000199960 194 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Gm24042-201ENSMUST00000083114 103 ntBASIC3.29□□□□□ -1.88
Brf1Q8CFK2 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms